Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0707 ATGGGCATTCATCATTTTGCAAGTATTATTACTATTTATTATATACTTCTCCTATATCTGAAAGTTTCTGTAGCAGTAAACTTCATTTCTCGGTCTCAATCCATTAGAGATGATGGCGTAACCTTAGTTTCCGAAAATGGAACTTTTGAACTTGGATTCTTCAGTCCTGGAAATTCCAACAAACGCTACCTGGGAATATGGTACAAGAACATCCCAATTCAAACTGTAGTTTGGGTTGCAAATAGGAACAACCCAATCAACGATTCCACCGGAATCTTAACACTAAACAGCATTGGAAATCTCGTCCTCGCTCAAAGCCACACAGTCGTTTGGTCTACAACCTCTGTGAAAAACCCACAAAATCCAGTAGCCAATTTATTGGAATCTGGAAATCTTGCAGTTAGAGAGGAGAAAGAAGCAAACCCAGAAACCTATTTGTGGCAAAGTTTTGATTACCCAACTGATACATTCTTACCAGGTATGAAATTTGGTTGGGACTTAAGAACTGGTCTAAATAGGCGTCTAGTAGCTTGGAAGAGTCCAGATGATCCTTCCACAGGAGAATTCTCTTGGGGGATGGTGCTCAATAATTATCCTGATGCCTATATGATGAAAGGAACCCAGAAATTCTACCGAGCTGGACCATGGAACGGTCTTCGCCCAAGTGGTTCACCACAAATCAAGGCCAACCCCATTTATGATTACAAGTTTGTTTCCAATAAGGATGAGATTTACTACATGTATCAGCTCAACGATCATTCTGTAATCTCAAGACAAATATTGAACATAACAACTCATGCTCGTCAACGTTTTGTATGGATTGAAGCTCAACAAGTTTGGAGGTTATATCAAACAGTGCCATTGGACTATTGTGATACTTATGGCCTCTGTGGAGCTTATGGAATCTGTACAATTTCAGGATCCCCAGTTTGTCAATGCTTGAGAGGGTTCAGTCCAAGGTCACCACAAAAATGGAAATCCATGGATTGGTCTAAAGGATGTGTCCGGAATAAACCGTTAAGCTGCAAAGATGGCTTTGTCAAAATGAGTAATTTGAAGCTACCTGATACTGCACATAGTTGGTTGAATGAGACAATCACTCTAGAAGAATGCAGAAACAGATGCTTGAACAATTGTTCTTGCATGGCCTATACGAATTCAGACATCAGAGGACAAGGTAGTGGCTGTGCTATGTGGTTTGGTGATCTGATTGATATTAGACAGTTTCCGGATAGTGGGCAGGATTTATATGTTCGAATGGCCGCCTCAGAATTAGGGGAAGTACGTGGGAGCAAGAAGAAGCTGACTATAATAGTTGTCTCAACCTTGGGTGCAATTTCTGTGATGCTTTTACTCAGTTTTTGTCGTTGTATCTACTATGACCAGAGGAAGAAGACAGAGAAATCGGAAAAAAAAGATCAGAACGAAAGGGTTGATGATCTGGATCTCCCTTTGCTTGATTTTTCTACTGTAGCTATGGCCACCGATAACTTCTCAGAGGAGAACAAGATTGGAGAAGGAGGTTTTGGGCCTGTATATAAGGGAAGATTATTGCATGGGCAAGAAATTGCTGTGAAGAAGCTTTCAAAAAGATCAGGACAAGGAATGATTGAGTTCAAAAATGAAGTGAAATTGCTAGTGAAACTTCAGCACCGAAATCTTGTGAAGCTTCTTGGTTGTTGCATTGAAGGAGAGGACAAAATGCTGGTGTATGAATACATGCCTAACGGCAGCTTGGACTACTTCATTTTCGGTATGAACACTTGA 1767 0.4052 MGIHHFASIITIYYILLLYLKVSVAVNFISRSQSIRDDGVTLVSENGTFELGFFSPGNSNKRYLGIWYKNIPIQTVVWVANRNNPINDSTGILTLNSIGNLVLAQSHTVVWSTTSVKNPQNPVANLLESGNLAVREEKEANPETYLWQSFDYPTDTFLPGMKFGWDLRTGLNRRLVAWKSPDDPSTGEFSWGMVLNNYPDAYMMKGTQKFYRAGPWNGLRPSGSPQIKANPIYDYKFVSNKDEIYYMYQLNDHSVISRQILNITTHARQRFVWIEAQQVWRLYQTVPLDYCDTYGLCGAYGICTISGSPVCQCLRGFSPRSPQKWKSMDWSKGCVRNKPLSCKDGFVKMSNLKLPDTAHSWLNETITLEECRNRCLNNCSCMAYTNSDIRGQGSGCAMWFGDLIDIRQFPDSGQDLYVRMAASELGEVRGSKKKLTIIVVSTLGAISVMLLLSFCRCIYYDQRKKTEKSEKKDQNERVDDLDLPLLDFSTVAMATDNFSEENKIGEGGFGPVYKGRLLHGQEIAVKKLSKRSGQGMIEFKNEVKLLVKLQHRNLVKLLGCCIEGEDKMLVYEYMPNGSLDYFIFGMNT 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0707 588 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Lele30g0707 588 CDD PAN_AP_plant 339 421 - -
Lele30g0707 588 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Lele30g0707 588 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Lele30g0707 588 SMART ntp_6 341 420 IPR003609 -
Lele30g0707 588 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Lele30g0707 588 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Lele30g0707 588 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 583 - -
Lele30g0707 588 ProSiteProfiles PAN/Apple domain profile. 342 421 IPR003609 -
Lele30g0707 588 Gene3D - 22 150 IPR036426 -
Lele30g0707 588 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 573 - -
Lele30g0707 588 CDD B_lectin 38 153 IPR001480 -
Lele30g0707 588 ProSiteProfiles Protein kinase domain profile. 498 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0707 588 Pfam PAN-like domain 343 406 IPR003609 -
Lele30g0707 588 Pfam D-mannose binding lectin 75 179 IPR001480 -
Lele30g0707 588 CDD EGF_CA 289 321 - -
Lele30g0707 588 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Lele30g0707 588 SMART blect_4 33 153 IPR001480 -
Lele30g0707 588 Pfam Protein tyrosine and serine/threonine kinase 501 583 IPR001245 GO:0004672|GO:0006468
Lele30g0707 588 Gene3D Hepatocyte Growth Factor 337 417 - -
Lele30g0707 588 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 420 - -
Lele30g0707 588 SUPERFAMILY Protein kinase-like (PK-like) 480 587 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0707 Lele-ChrLele30 11603448 11605539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0707 438 584 Receptor kinase-like Gene Family AT4G23190 48.299 9.58e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0707 S_locus_glycop 8.6e-29 No_clan