Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0706 ATGTACCCAAAAAAGAAAACAATTCTGCATTGCCAAGCACAGAACATGACTCTAATGGACACTCTCTGTTTCATGATCATCGTTGCTTATGTTCTTGTCTCTGGTTTCAAAGCTTCCATGGCAGTTACTTCCATTCGTCATTCCCAAAACCTCAGTGACGCCTCAAGAACTACCTTAGTTTCCCAAGGTGGAAACTTTGAGCTCGGTTTCTTCACCCCAGGAAACTCCGGCAAACGCTACCTGGGAATTTGGTACAAGAATATCCCACAAACTGTAGTTTGGGTAGCAAATAGCATCAACCCAATTAACGATTCCTCCGGCGTATTAACAGTAAACACCACTGGCAACCTCGTCCTCACCCAAAACAACGCAGTCGTCTGGAACACAAGTTTAACAAAGCAGGCCCAGAATCCATTAGCAGAGCTCTTAGATTCCGGAAATTTTGTGGTAAGAGATGAAAATGAAGCAAACGCAGAAGTTTATTTGTGGCAAAGCTTCAATTATCCTTCTGATACATTACTTCCTGGGATGAAGCTAGGATGGGACCTGAGAACTCATCTGAACAGAAAAATAACAGCTTGGAAGAGACCTAATGATCCAACCCCGAGTGGGTTTTCTTGGGAATTATTGCTTCATAACTATCCTGAGTTCTTCCTCATGAAGGAATCAAAGAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGCGTACCAGATTTAAAGCCAAACCCAATTTATGATTTCAACTTTGTATCAACTTCGGACGAGGTTTACTACACCTATAGCCTGAATAACACTTCTGTGATCTCAAGATTGATGGTGAACCAAACCAAGTTTCAGGGAATTCGTTATGTGTGGGTGGAGGCATATCAAAATTGGATGATTTACCAGACACTGCCAAAGGATTATTGTGATAACTATAACCTTTGTGGACCAAATGGGAATTGCATTATCAGTGACTCACCTGTTTGCCAGTGCTTGAAAGGGTTCAAACCTAAGAAACCACAAGCTTGGAACTCGATGGATTGGTCAGGAGGATGTGTGAGAAATGAAGCATTGAACTGTAGTAATGGAAACAAGGATGGGTTTTTCAGATTAACTGGGTTAAAAGTGCCAGAAACTGAACACACTTGGATAGATCAGAGCATTAGTCTAGAAAGATGCAGAAAGAAATGTCTAAGTAATTGTTCTTGCACGGCCTATACAAGTTCATATATTTCAGGAGCAGGAAGTGGCTGTGTTATGTGGTTTGGAGATTTGATTGATATCAGAAAGTCTACTTCTGATGGGCAGGATCTGTTTATTCGAATGGCGATTTCAGAGCTAGAAGAAGAAGAAGAAGGAAGGGAGAGCAAGAAGAAACTGACAATAACAATTGTTTCAACCTTGGGTGGAATTTCTGTAATGCTTTTACTAGGGTTTTGTTGTTATGTCTACCAAAACCAGAGGAAGAGAAAGATGGCTGATAAACCAGATCACAACCAAGAAGATCAAAACAGGGGAGAAAGTGTGGATGATCTGGGTCTCCTATGGATTGACTTTTCAACAATAGCTATTGCGACAGATAACTTCTCGTTGGAGAACAAGATCGGAGAAGGAGGCTTTGGATTTGTATATAGGGGAAAATTAGTCCATGGGGGAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATAATTGAGTTCAAGAATGAAGTGAAACTGATAGCGAAACTCCAACACCGAAATCTTGTCAAGCTTCTTGGTTGTTGCACTCAAGGAGATGACAAAATGCTGGTGTATGAATACATGCCTAATGGCAGCTTGGACGGTTTCATTTTTGATGATACGAAAGGCAAAGTGTTGGATTGGTCTAGACGATTCTATATCATATGTGGAATTGCTAGGGGTCTTGTCTATCTTCATCAAGATTCTAGATTAAGAATTATCCACCGAGATCTCAAAGCGAGCAACATCTTACTTGACGACAAGTTAAATCCAAAAATATCAGATTTCGGCATCGCTAGAATCTTTGGAACTGACCAAATAGAAGGAAACACAAAACGAATAGTGGGCACTTATGGATATATGGCACCAGAATACGCCATACATGGTCTTTTTTCCGTGAAGTCAGATGTTTTCAGTTTCGGAATATTGTTATTGGAGATTATAAGTGGTAAGAGAAGCAGAGGATTCTATCACCCAAACCACTCCCTCAACCTAATTGGTCATGCTTGGAATCTATGGAAAGAAGGAAATGAAATAGAACTAATAGACACAAACTTAGTGGAATCATGCGATGTATCAAAAGTACAACGTTGTATTCACGTCGGCCTCTTGTGTGTCCAACACTATCCAGAAGATAGGCCTACTATGCCCTCTGTGGTTCTAATGTTGGGAAGTGAAACTGAACTGGCTCAACCTAAAGCACCTGGTTTCTATACCAATAAGGATTTCACCGAAACAAATTCAAGCACAAGCCAAATGGAAAATAACTCTACCAACGAAGTAACCATTACATTGTTAGAAGCTCGATGA 2535 0.4059 MYPKKKTILHCQAQNMTLMDTLCFMIIVAYVLVSGFKASMAVTSIRHSQNLSDASRTTLVSQGGNFELGFFTPGNSGKRYLGIWYKNIPQTVVWVANSINPINDSSGVLTVNTTGNLVLTQNNAVVWNTSLTKQAQNPLAELLDSGNFVVRDENEANAEVYLWQSFNYPSDTLLPGMKLGWDLRTHLNRKITAWKRPNDPTPSGFSWELLLHNYPEFFLMKESKKFMRIGPWNGLYFSGVPDLKPNPIYDFNFVSTSDEVYYTYSLNNTSVISRLMVNQTKFQGIRYVWVEAYQNWMIYQTLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKKPQAWNSMDWSGGCVRNEALNCSNGNKDGFFRLTGLKVPETEHTWIDQSISLERCRKKCLSNCSCTAYTSSYISGAGSGCVMWFGDLIDIRKSTSDGQDLFIRMAISELEEEEEGRESKKKLTITIVSTLGGISVMLLLGFCCYVYQNQRKRKMADKPDHNQEDQNRGESVDDLGLLWIDFSTIAIATDNFSLENKIGEGGFGFVYRGKLVHGGEIAVKRLSGSSRQGIIEFKNEVKLIAKLQHRNLVKLLGCCTQGDDKMLVYEYMPNGSLDGFIFDDTKGKVLDWSRRFYIICGIARGLVYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGIARIFGTDQIEGNTKRIVGTYGYMAPEYAIHGLFSVKSDVFSFGILLLEIISGKRSRGFYHPNHSLNLIGHAWNLWKEGNEIELIDTNLVESCDVSKVQRCIHVGLLCVQHYPEDRPTMPSVVLMLGSETELAQPKAPGFYTNKDFTETNSSTSQMENNSTNEVTITLLEAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0706 844 ProSiteProfiles EGF-like domain profile. 303 339 IPR000742 -
Lele30g0706 844 CDD STKc_IRAK 533 798 - -
Lele30g0706 844 Pfam Protein tyrosine and serine/threonine kinase 528 795 IPR001245 GO:0004672|GO:0006468
Lele30g0706 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Lele30g0706 844 Pfam Domain of unknown function (DUF3403) 801 844 IPR021820 GO:0004674
Lele30g0706 844 ProSiteProfiles PAN/Apple domain profile. 358 441 IPR003609 -
Lele30g0706 844 Gene3D Transferase(Phosphotransferase) domain 1 603 812 - -
Lele30g0706 844 Pfam S-locus glycoprotein domain 228 336 IPR000858 GO:0048544
Lele30g0706 844 ProSiteProfiles Protein kinase domain profile. 527 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0706 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 200 IPR036426 -
Lele30g0706 844 PIRSF SRK 13 844 IPR024171 GO:0004674
Lele30g0706 844 SMART serkin_6 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0706 844 CDD PAN_AP_plant 356 441 - -
Lele30g0706 844 CDD B_lectin 58 169 IPR001480 -
Lele30g0706 844 Gene3D - 38 167 IPR036426 -
Lele30g0706 844 SMART blect_4 50 169 IPR001480 -
Lele30g0706 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 602 - -
Lele30g0706 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 38 166 - -
Lele30g0706 844 Pfam PAN-like domain 358 426 IPR003609 -
Lele30g0706 844 SUPERFAMILY Protein kinase-like (PK-like) 511 798 IPR011009 -
Lele30g0706 844 ProSiteProfiles Bulb-type lectin domain profile. 44 163 IPR001480 -
Lele30g0706 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 32 789 - -
Lele30g0706 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Lele30g0706 844 SMART ntp_6 361 440 IPR003609 -
Lele30g0706 844 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Lele30g0706 844 Gene3D Phosphorylase Kinase; domain 1 487 602 - -
Lele30g0706 844 Pfam D-mannose binding lectin 91 195 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0706 Lele-ChrLele30 11597199 11600574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0706 513 844 Receptor kinase-like Gene Family AT4G11530 57.522 2.03e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0706 PK_Tyr_Ser-Thr 4.6e-48 CL0016