Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0704 ATGGCCGCTCTTCTTCCTCTTATTCTCGCTTTCATCACTTTATTCTCATCACTTTCTTCTGCAACTGATACTCTCACACAGTCTCATTCACTTGTTGATGACGCAAACGGAACCACCACAACCACAACCTTGGTGTCCAACGACGGAACCTTCCAACTTGGTTTCTTCTCCCCAGGCTCTTCCTCAAACCGCTACCTTGGCATCTGGTACAGAAACATCCCCGATACGACCGTCGTCTGGGTGGCTAACCGCCAAACGCCCTTGATCAGAAACGCCACCAACTCCACAACTCCGAGTCGTTTAATCATAACTGACGAGGGAGGTCTCGTGCTCCTCAGCCAAAACGGCACCCTTGTTTGGTCAGCAAACACGACGGTGAAAAGCTCGAGTGTAAGTGTTGTTGCACAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGAACAGGACAAGGTTGGTGATGACGACGACGACGACGACAAGTATATATGGCAGAGTTTTGATTATCCAAGTGATACGTTCTTACCTGGAATGAAAATTGGGTGGGATCTGAGAAGAGGGATTAACAGGGAATTGACGGCGTGGAAGAGTTGGGACGATCCTTCTGTCGGAGACTTAAGATGGGGTATGGTGGTCGGAGTGACGCCGGAGATGGTGATGTGGAAGGGAAAAGAAGAGTACTATAGAAGTGGTCCTTGGAACGGAGTTATTTTCACTGGGAAAACTACACCAATCTTTGACCTTCAATTCGTCTCTAATCAATATGAGGTGGTATTCACTTCCAAGCTGCAGAACAAATCGGTGATAACAAGGGTTGTTCTGAACGGAACTACTTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGTTGGAGGCTTTATTCATCTGTGCCCAGAGATAATTGCGACAACTACAATCTCTGTGGCCCCTATGGAAATTGCATCATTAACGAATCTCCCCCATGCCAGTGTCTCTCAGGGTTCAAGCCAAAATCACCCCAAAACTACAATGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAATCGTGGAGCTGTGGGGTCAGAAATAGAGACGGGTTTCGAAGATTCAGTGGGTTGAAAATGCCGGATACAAGAAAAGCTTGGGTTAATGCAAGCATGACACTTGGGGATTGCAGGATGAAATGCTTGGCAAATTGTTCCTGCAATGCTTATGCAAACTTGTATGTTACTGGGGGTGGTATTGGGTGTTTGATTTGGTTTGGGGAACTTATTGATTTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATCCGAATGACTGCCTCTGAGACTGAGGCAAAAGAGCACAAGAAAATGGTGGGAATTGTGGTGATAGCGGTTACTGTTCCATTGGTTCTTCTGGCGACTTTAGCTTTCTCTTGCATTCACTGGAGGAAAAGAAAGCGTAGAGGGAAAACCTCCATAGAGAACAACAATGAAGGTGAACAGGAGGACTTAGACCTACCATTCTATAGCCTTGCTACAATTGTTCGTGCCACTAATGACTTCTCAAATGATCAGAAGCTTGGCCAAGGAGGTTTTGGACCAGTATACAGGGGTATTTTAGGAGATGGACAAGAGATTGCTATCAAGAGGTTATCCCGGAGCTCTGGACAAGGAATGAAAGAATTTAAGAATGAAGTGTCATTGTGTACGAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGTTGTTGCATCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCCAACAAAAGCCTGGACAACTTTTTATTTGATTCTAGGCAGAGCAAATTCCTAGACTGGCCAAGGCGCTTTCGTATCATATTTGGAATTGCTCGAGGGCTTCTTTATCTTCATCAAGATTCTAGATTACGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTGTTAGATAGGGAGATGAACCCGAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGCTATTCTCCATTAAATCTGATGCGTTTAGCTTTGGTGTGTTACTATTGGAAATAGTAAGTGGAAGGAAAAACCGAGGAGCTTCTTATCCAAACCAGGGTTTTAACCTTATTGGACATGCATGGAGTTTGTGGAAGGAGAGCAACCCATTGGAATTGGTTGATGGCTGTTTAGGGGAAGCTTTTAACTTATCAGAAGCAATGCGTTGTATTCAGGTTGGTCTTCTGTGTGTGCAGCTGCATCCTGAGGATAGGCCAAACATGGCCTCAGTAATTGTGATGTTGAGCAGTGAGAATGTGTTGGCTGAGCCCAAGGAGCCTGGTTTCTTGATAGAGAGGATGATGGTGGGAGAAGAATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTATGACTCAGTTGGAGGCCAGATAA 2499 0.4442 MAALLPLILAFITLFSSLSSATDTLTQSHSLVDDANGTTTTTTLVSNDGTFQLGFFSPGSSSNRYLGIWYRNIPDTTVVWVANRQTPLIRNATNSTTPSRLIITDEGGLVLLSQNGTLVWSANTTVKSSSVSVVAQLLDSGNLVLRNEQDKVGDDDDDDDKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELTAWKSWDDPSVGDLRWGMVVGVTPEMVMWKGKEEYYRSGPWNGVIFTGKTTPIFDLQFVSNQYEVVFTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIINESPPCQCLSGFKPKSPQNYNALDWTQGCVRSESWSCGVRNRDGFRRFSGLKMPDTRKAWVNASMTLGDCRMKCLANCSCNAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMTASETEAKEHKKMVGIVVIAVTVPLVLLATLAFSCIHWRKRKRRGKTSIENNNEGEQEDLDLPFYSLATIVRATNDFSNDQKLGQGGFGPVYRGILGDGQEIAIKRLSRSSGQGMKEFKNEVSLCTKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNFLFDSRQSKFLDWPRRFRIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDREMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDAFSFGVLLLEIVSGRKNRGASYPNQGFNLIGHAWSLWKESNPLELVDGCLGEAFNLSEAMRCIQVGLLCVQLHPEDRPNMASVIVMLSSENVLAEPKEPGFLIERMMVGEECASSGNQISSSTNEVTMTQLEAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0704 832 CDD STKc_IRAK 520 785 - -
Lele30g0704 832 ProSiteProfiles PAN/Apple domain profile. 355 438 IPR003609 -
Lele30g0704 832 CDD B_lectin 44 170 IPR001480 -
Lele30g0704 832 Pfam D-mannose binding lectin 77 196 IPR001480 -
Lele30g0704 832 PIRSF SRK 1 832 IPR024171 GO:0004674
Lele30g0704 832 Pfam PAN-like domain 357 423 IPR003609 -
Lele30g0704 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 167 - -
Lele30g0704 832 ProSiteProfiles Protein kinase domain profile. 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0704 832 SMART serkin_6 514 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0704 832 SUPERFAMILY Protein kinase-like (PK-like) 497 791 IPR011009 -
Lele30g0704 832 SMART blect_4 35 170 IPR001480 -
Lele30g0704 832 SMART ntp_6 358 437 IPR003609 -
Lele30g0704 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 793 - -
Lele30g0704 832 CDD PAN_AP_plant 354 436 - -
Lele30g0704 832 Pfam Protein tyrosine and serine/threonine kinase 516 782 IPR001245 GO:0004672|GO:0006468
Lele30g0704 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 589 - -
Lele30g0704 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Lele30g0704 832 Gene3D Transferase(Phosphotransferase) domain 1 590 796 - -
Lele30g0704 832 ProSiteProfiles Bulb-type lectin domain profile. 29 158 IPR001480 -
Lele30g0704 832 MobiDBLite consensus disorder prediction 812 832 - -
Lele30g0704 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 201 IPR036426 -
Lele30g0704 832 Pfam S-locus glycoprotein domain 228 334 IPR000858 GO:0048544
Lele30g0704 832 Gene3D - 17 167 IPR036426 -
Lele30g0704 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 776 - -
Lele30g0704 832 Gene3D Phosphorylase Kinase; domain 1 473 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0704 Lele-ChrLele30 11573170 11577593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0704 446 800 Receptor kinase-like Gene Family AT4G23190 54.294 7.84e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0704 PK_Tyr_Ser-Thr 2.7e-46 CL0016