Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0703 ATGGTCACCTTTCCTTGTGTGCTTCTTCTGTTCTTCCTTCCATTGGCCTCTTCTGCAACTGATATTAATATCATTACACAATCTCAGCCACTTGTTGATGATGAAAGAACCACCTTGGTGTCTGAAAATGGAAAGTTTGAACTGGGATTTTTCAGCCCAGGTAGTCATCCGCATCGCTATGTTGGGATCTGGTTCAAAACCATACCTGTTAGAACTGTTGTTTGGGTTGGTAACCGTAAAAACCCAATCAAAGACAGTTCAGGCAAGTTGATCATAAACAAAGAAGGAAACCTAGTGCTTCTCAACAAGAATGACACACTTGTTTGGTCGGCGAATTCAACAGAAAAGGCGGCATCGAGTCCAATTGTGCGGCTTTTAGACTCTGGAAACTTGGTACTTACAGATGAGAAAGATCAGAATCCACAAAACTACTTGTGGAAAAGCTTTGACTATCCTACTGATACATTTTTGCCAGGCATGAAGATAGGATGGGACCTGAAAACCGGTCTTAACCGACGTTTGATAGCGTGGAAGAACTGGGATGACCCTTCTCCAGGAGACTTGAGAAGCGAGCTCTTGCCTCACAATTTACCAGAAATGGTTTTCTGGCAAGGCTCATCAGAATATTTCAGGCTGGGTCCTTGGAATGGTGTTTCATTTAGTGGCTCTACTTCAGTGAACAACAATACAACATTGGTCTCCAACAAAGATGAGGTATACTTCATGTACAATCTCATCAATGAGTCAATGATTTTTAGAGATGTCTTGAACCAAACAAAATATGCCATGCAAAGATTTGTGTGGGATGAAGATACTCAGAGTAGGAAATCTTTTGGTGACTTGCCAAGAGATAACTGTGAAAAATATAATACTTGTGGCTCAAATGGAAATTGTATCATTGAATTATCAAAATGCCAATGCTTGGGAGGATTCAAGCCAAAATCACCCAAAAATTGGGACATGTTTGATTGGACAGAAGGGTGCGTTCGCAGTGAACAGTGGAGTTGTAAGGTGAAAGGCAAGGACAATTTTGTTAAATTTACAGGGCTGAAATTACCAGATACTACACATACTTGGGTTAATGCAAGTATGACACTTGAGGAGTGTAAAGCCAAATGCTGGGAAAATTGTTCTTGTTCTGCTTATGCTAGTTCAGATATCAGAGGAGGAGGAAGTGGTTGTGTCATGTGGTTTGGTGATCTTATTGACATAAATCAAATGTCTAATGTTGGCCAAGATCTATTTATTCGACTTGCCGGTACAGATACAGAAACAGCTAACCATGAAGGTGCTAATGATGAAAACAAGAGAAAGGGAATTCTGATAGCAGCTACCATTTTAGCAGCTCTTGTGATGCTTTTCATTTTCCTCTGTATTTACAAGAGAAGAAGAAAATCTAAAGATCATACTAACTCATTGATGACCTATTTCAGTGGTTATATGGCACCAGAATATGCAATCCATGGGTTATTTTCCACGAAGTCTGATGTATTCAGTTTTGGAATATTACTATTGGAAATAGTGAGTGGAAAGAAAAGCAGAGGGTTCTCCTTATCAAACCAAAGTCTTAATCTTATTGGGCATGCATGGAGATTGTGGAAAGAGAACATCACACTGAAATTGATTGATGCACATTTGGAAGAGTCTTGTATTGAATCAGATGTATTGAGATGCATCCATATAGGTCTTCTTTGTGTGCAACACCATCCTAATGATAGGCCAAACATGACATATGTGGTTGTGATGTTAAGTAGTGAGGATGACTTGCCTCAACCTAAAGAGCCTGGTTTCCTCTTAGAAAATATACCAATTACAATTGAATCTTCAGCCAGCAATCACATGCCAGCTTCAACGAATAAATTTTCTATAACTGAAATAGAACCTAGATAA 1890 0.3926 MVTFPCVLLLFFLPLASSATDINIITQSQPLVDDERTTLVSENGKFELGFFSPGSHPHRYVGIWFKTIPVRTVVWVGNRKNPIKDSSGKLIINKEGNLVLLNKNDTLVWSANSTEKAASSPIVRLLDSGNLVLTDEKDQNPQNYLWKSFDYPTDTFLPGMKIGWDLKTGLNRRLIAWKNWDDPSPGDLRSELLPHNLPEMVFWQGSSEYFRLGPWNGVSFSGSTSVNNNTTLVSNKDEVYFMYNLINESMIFRDVLNQTKYAMQRFVWDEDTQSRKSFGDLPRDNCEKYNTCGSNGNCIIELSKCQCLGGFKPKSPKNWDMFDWTEGCVRSEQWSCKVKGKDNFVKFTGLKLPDTTHTWVNASMTLEECKAKCWENCSCSAYASSDIRGGGSGCVMWFGDLIDINQMSNVGQDLFIRLAGTDTETANHEGANDENKRKGILIAATILAALVMLFIFLCIYKRRRKSKDHTNSLMTYFSGYMAPEYAIHGLFSTKSDVFSFGILLLEIVSGKKSRGFSLSNQSLNLIGHAWRLWKENITLKLIDAHLEESCIESDVLRCIHIGLLCVQHHPNDRPNMTYVVVMLSSEDDLPQPKEPGFLLENIPITIESSASNHMPASTNKFSITEIEPR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0703 629 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 418 - -
Lele30g0703 629 Pfam PAN-like domain 336 404 IPR003609 -
Lele30g0703 629 Pfam Protein tyrosine and serine/threonine kinase 475 581 IPR001245 GO:0004672|GO:0006468
Lele30g0703 629 Gene3D Transferase(Phosphotransferase) domain 1 450 595 - -
Lele30g0703 629 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 149 - -
Lele30g0703 629 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 470 574 - -
Lele30g0703 629 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 461 588 - -
Lele30g0703 629 Gene3D Hepatocyte Growth Factor 335 415 - -
Lele30g0703 629 CDD B_lectin 28 152 IPR001480 -
Lele30g0703 629 ProSiteProfiles Bulb-type lectin domain profile. 22 146 IPR001480 -
Lele30g0703 629 CDD PAN_AP_plant 335 419 - -
Lele30g0703 629 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Lele30g0703 629 SMART ntp_6 339 418 IPR003609 -
Lele30g0703 629 Pfam S-locus glycoprotein domain 210 315 IPR000858 GO:0048544
Lele30g0703 629 Pfam D-mannose binding lectin 72 178 IPR001480 -
Lele30g0703 629 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Lele30g0703 629 Gene3D - 19 149 IPR036426 -
Lele30g0703 629 SMART blect_4 28 152 IPR001480 -
Lele30g0703 629 SUPERFAMILY Protein kinase-like (PK-like) 477 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0703 Lele-ChrLele30 11569207 11572439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0703 465 629 Receptor kinase-like Gene Family AT4G23140 46.023 6.08e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0703 PK_Tyr_Ser-Thr 4e-09 CL0016