LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g0697	ATGCAAGCGCCTGCAGCTGTTTCATTGTCGACCCCTGGGGCTTCTTCAACTGTTAGATACTTAGGGATATGGAACAAGAAATCTCCTTCGACAGTCTTCTGGGTGGCCAAACGAAGCACACCCATCAACAACAACGATAGTGGAAAGGGCGTTTTAGGGTTAAATGATCATGGGGTTCTTCTTCTTCTTGATGCCGAAAACAACACAGTGTGGTTCTCCAACAATTCATCATCAATCAGAGCATATAACCCTTTTGCCCAACTCCTGGATTCTGGAAATCTCGTGGTGAACAATGGCAACTTGGACCAACTCTTATGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCAGGAATGAAGCTTGGGTGGGATCAAGAAATGGGTTTGGATAGATTTTTGTCATCTTGGAAAAGTTCAGATGATCCAGGGTCATGGAATGGCTTCTCTTTCACGGGATTTTCAAATCATTTTGAGGATCCGCTGCGGGTGATAACCACTGGTAACCCTGATCCGTGTGACAATTATGCCTTGTGTGGTGCAAATTCTATCTGCAACATTAGTAACAATCCTATTTGTGAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGCGCAGTGGCTGCACTAGAAGAGATTCTTTGGACTGTGATAATAATGACGAATTCAAGAAGTATACAGGCATCAAGTTGCCAGACACTTCTTCTTCATGGTGTAACAAGACCATGGACCTCGAGGAATGTAAGATATTATGCCTACAAAACTGTTCTTGTAAAGCATATTCAAATTTGGATATTCGAGGTGAAGGAAGTGGCTGCCTGATATGGTTTGATCAAGTATTGGACATGAGACAATTTCCTGCAGGGGGACAAGACCTCTATGTACGAGTTCCTGCTTCAGAGCAAGGTAGCTTCACTGTTTTGGCTAGTGGCTACTGGCTACTGGCATTGCCTCTTACTAATATCATTGAGAACATGAGAAGGTGGGAGGGGACTGGGAAAAGAGAGGAGTATGTTAAAGGCATTGACAAAACCAATTGTGCACTTTTTTTGGGTTCTGAAATTCGGGATATTGTTATATTCAACAACCACAATCTAGAGAAGGAAGTCATGGATCTACCAACATTTGACCTGTCAGTCATAGCTAAAGGGTACACTAGAAGATGGAAAAGTGGTAGCTGTGAAAAGGCTGTCAACGAAATCTGTGGATATAAGCCTCCTGAATATGCCGTGCATGGACAATTTTCAATGAAATCCGATATCTTTAGCTTTGGTATAATAGTGCTAGAAATTGTTAGTGGGAAGAAGAACAGAGGATTTACAGACCCAGAATACTACCTTAATCTTCTTGGACATGCATGGAGACTGTGTATCCAGGGAAGACCAATGGAACTATTGGATGAATGTTTAAAGGGAAGTTGCAACGAATCAGAAGTCATAAGATGTATACAGGTAGGATTATTATGTGTGCAACAAAGAGCTGAAGATAGGCCCGATATGTCTGCTGTGGTTCTAATGTTAAATGGTGAGAAATTGTTGCCACGGCCAAAAGCTCCTGCTTTTTACACTGCAAGTGATGTCCCTCCTGATCCAACTTCTTTAGACCAAAGATTTGTACAGTTCTCTCAAAATGAAATTTCTGAAACCATGCTAGAGGGAAGATGA	1686	0.4211	MQAPAAVSLSTPGASSTVRYLGIWNKKSPSTVFWVAKRSTPINNNDSGKGVLGLNDHGVLLLLDAENNTVWFSNNSSSIRAYNPFAQLLDSGNLVVNNGNLDQLLWQSFDHPCDTLMPGMKLGWDQEMGLDRFLSSWKSSDDPGSWNGFSFTGFSNHFEDPLRVITTGNPDPCDNYALCGANSICNISNNPICECLRGYEPKNFKEWNVSDWRSGCTRRDSLDCDNNDEFKKYTGIKLPDTSSSWCNKTMDLEECKILCLQNCSCKAYSNLDIRGEGSGCLIWFDQVLDMRQFPAGGQDLYVRVPASEQGSFTVLASGYWLLALPLTNIIENMRRWEGTGKREEYVKGIDKTNCALFLGSEIRDIVIFNNHNLEKEVMDLPTFDLSVIAKGYTRRWKSGSCEKAVNEICGYKPPEYAVHGQFSMKSDIFSFGIIVLEIVSGKKNRGFTDPEYYLNLLGHAWRLCIQGRPMELLDECLKGSCNESEVIRCIQVGLLCVQQRAEDRPDMSAVVLMLNGEKLLPRPKAPAFYTASDVPPDPTSLDQRFVQFSQNEISETMLEGR	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g0697	561	CDD	B_lectin	15	112	IPR001480	-
	Lele30g0697	561	ProSiteProfiles	Bulb-type lectin domain profile.	1	109	IPR001480	-
	Lele30g0697	561	Pfam	Protein tyrosine and serine/threonine kinase	410	512	IPR001245	GO:0004672\|GO:0006468
	Lele30g0697	561	Gene3D	-	5	109	IPR036426	-
	Lele30g0697	561	SUPERFAMILY	Protein kinase-like (PK-like)	410	542	IPR011009	-
	Lele30g0697	561	CDD	PAN_AP_plant	222	305	-	-
	Lele30g0697	561	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	223	304	-	-
	Lele30g0697	561	SMART	ntp_6	225	304	IPR003609	-
	Lele30g0697	561	Pfam	D-mannose binding lectin	31	138	IPR001480	-
	Lele30g0697	561	Gene3D	Hepatocyte Growth Factor	220	301	-	-
	Lele30g0697	561	Pfam	PAN-like domain	224	290	IPR003609	-
	Lele30g0697	561	ProSiteProfiles	EGF-like domain profile.	169	205	IPR000742	-
	Lele30g0697	561	ProSiteProfiles	PAN/Apple domain profile.	224	305	IPR003609	-
	Lele30g0697	561	PANTHER	BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN	406	504	-	-
	Lele30g0697	561	SMART	blect_4	2	112	IPR001480	-
	Lele30g0697	561	Pfam	S-locus glycoprotein domain	170	203	IPR000858	GO:0048544
	Lele30g0697	561	Gene3D	Transferase(Phosphotransferase) domain 1	379	520	-	-
	Lele30g0697	561	SUPERFAMILY	alpha-D-mannose-specific plant lectins	32	143	IPR036426	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g0697	Lele-ChrLele30	11531937	11537258	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele30g0697	410	543	Receptor kinase-like Gene Family	AT4G23140	47.407	6.87e-36	140

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lele30g0697		PK_Tyr_Ser-Thr	6.2e-06	CL0016