Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0694 ATGGCGGAGAAGCAACGTAATTACTGTGCGAAGAAGAGGGTCAAAATTAAGATTCGGTGTATTTATCATACGGTACGGAGGAGAGGGAGCGATAGAGGAAGGGGAAGGGGAAGAGAAGAAGAAGAAGAAATGGAGGATTGCGCGCTGTGCGGGAAGAAGGCGAGGATGTACTGTGAGTCGGACCAGGCTAAATTATGCTGGGACTGCGACGACAAGGTTCACGGCGCCAACTTTCTGGTGGCCAAGCACACCAGGGTTCTTCTCTGCCGGACCTGTCAGTCTTTCACTCCATGGAAAGCATGTGGTCCCAAGCTCACGCGGACTCACTCTCTCTGCCACCACTGTGCGACCGATTCACACAAGCATCAACAGGAACAAGATGATCGTGATGATCATCATCATGATCTACGTGATAGTCCTGATCTCGACGAGGAAGAGGAGGAGGATGGAGATTCTAGTTCCGATGCTGACTCTGGTTATGAAGATGATGACGAAGAAGACGAGGGAGAGGAGGAGGAGGAAGGAGAGAACCAGGTGGTTCCATGGTCTTGCGCTTCTGCTTCGGTGCCATCGCCGCCTCTTGCGAGCCCTGTTTCAGCTGGTTCTGATTTAGCCTGGAAGCGGCGGCGAGCGAGTTTGGTTGTCGATTCCGATGATGAGATCGGATGTTCTTCATCTGAAATGCCCTCTGCCTCGCAACTACCAGACGATGATTCATCTTCTTGGAATATTCTCAGGCCATGGAAGCATCCTAGAACCACTCAGCAGAGCCAATAA 777 0.5161 MAEKQRNYCAKKRVKIKIRCIYHTVRRRGSDRGRGRGREEEEEMEDCALCGKKARMYCESDQAKLCWDCDDKVHGANFLVAKHTRVLLCRTCQSFTPWKACGPKLTRTHSLCHHCATDSHKHQQEQDDRDDHHHDLRDSPDLDEEEEEDGDSSSDADSGYEDDDEEDEGEEEEEGENQVVPWSCASASVPSPPLASPVSAGSDLAWKRRRASLVVDSDDEIGCSSSEMPSASQLPDDDSSSWNILRPWKHPRTTQQSQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0694 258 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 47 248 - -
Lele30g0694 258 SMART bboxneu5 42 88 IPR000315 GO:0008270
Lele30g0694 258 MobiDBLite consensus disorder prediction 223 258 - -
Lele30g0694 258 CDD Bbox1_BBX-like 47 88 - -
Lele30g0694 258 MobiDBLite consensus disorder prediction 141 177 - -
Lele30g0694 258 MobiDBLite consensus disorder prediction 181 195 - -
Lele30g0694 258 MobiDBLite consensus disorder prediction 122 140 - -
Lele30g0694 258 MobiDBLite consensus disorder prediction 122 258 - -
Lele30g0694 258 Pfam B-box zinc finger 44 87 IPR000315 GO:0008270
Lele30g0694 258 ProSiteProfiles Zinc finger B-box type profile. 42 88 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0694 Lele-ChrLele30 11516014 11516951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0694 47 227 C2C2-CO-like Transcription Factor Family AT4G27310 43.284 2.25e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele30g0694 zf-B_box 5.3e-08 No_clan