Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0678 ATGCTTGAATCGCTCCAGCGGAGAGACGAAGAAGAGAATAAGCCAAAGGACTTGCCGCCAGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCAGCGAGAAGGTCATTGCCGAATAACTTCAACTTCAAGGTTAATGGAAATCCTGGTGAGACAGAATGCCTTCCGAACGGATTTCATGATGCGATCGAAGAGACTAAGAGGAAAGTTACAGTTGATTTGGGACACAAGAGAAACGGAAGCCTCGAGATGAAGAAGCTGAAGCGGGAAGTGGAATCGCCGTACGCCCTCGCATCAGAAGAGAACCAGAGCGACCAAATATCATCGAAGAGTCGAGAATCCATCTCGGATGATATCTTTACTTATTTCATAAAGAAGACACATTTTTTATGGCATGTTCATTTCTGTGTTCGGTTCTTTTCCCAGAAACTTCATGTTTGGTGTAGGCAACCAAATGGGCACTGGGGACTAGGAAAGATACAGTCAACTTCAAAAGAAGATGCTTCAGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAAAGCTCCTACCAGCTAATCCAGATATTTTAAAAGGCGTTGATGATCTCATACAGCTGAGTTATCTGAATGAGCCATCAGTTCTTCACACTCTTCGTTTTAGATATTCTCAAGAAATGATTTATAGTAAAGCAGGACCCATTTTAATAGCACTCAATCCCTTCAAAGATGTCCAGATTTGTGGAAATGATCATGCCACAACTTATAGGCAGAGACGCATGACTGACCCACATGTTTATGCCGTGGCAAATGCAGCTTATAATGAGATGATGAGAGATAAAGTAAAGCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAACAAAAATCGCTATGCAGTATTTGGCTGCTCTGGGTGGTGGAAGCTGTGGCGTAGAAAACAAAGCTCTTCCGACACATTTCATTCTAGAAGCTTTTGGGAATGCAAAAACACCAAGGCACAACAATTCTAGCAGATTTGGAAAATATGTGGAGCTAAAATTCAAACCTTCAAGAGTTGTTCAGCTAACCAGTGGCGAGAGGTCATTTCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGTTCTTAAAGAGAGGCTGAATCTTAGAGAGGCAAGCGAATATAAATATCTTAATCAGAGTGACTGTATGGCAATAGATGGCGTTGATGATGCTAAAATGTTTAATAAGCTGCTGAAAGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCTAGTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCTTGTTGTGGTGGTGGATAATGAAGCTGTCAACAGTGCCGCCATGCTGATGGGTTGCAGTCCCCAAGAGTTAATAGTAACTTTGTCTACTTGTAAAGTCCAAGCTGGCAAGGATACTATTACTAGAAGTTTGACATTGAAGCAGGCAATTGAAACAAGAGATGCATTGGCACAATTTATGTATGAAAGCTTGTTTGGGTGGCTCATAGAAAAAATTAACAAGTCACTTGGAGCTGGCAAACGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAGTCATTCAAGAAACCATCAGGAATACTTTCATTGTTGGATGAGGAATCAAATTTGCTCAAGGCCACTGATCTCACGTTTGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAAGGGGAAAGAGGGAGGGCTTTTGGTGTTCGTCACTTTGCAGAGGAGGTTTCATATGATACGAATGGCTTTCTACAGCAGAACAAAGATCTGCTGCCTTCTGATTACATACGATTTCTGGCATCATGTAGCTGTCAACTGCTGCAGCTGTTCTCGAAAATGCATAGCCAAACACAGAAACAATTGAATTCTTTACAAATGAATGTATTAGACTCGCAGAAGCAGAGTGTCGGTGCAAAGCTCAAGGGCACTGAAATGTATGGGTTTCTGCTTTTGGAGCCCAATGTAATTCAGGATCCACTGAGCATCTCAGTTGCTGTATTGCGACAATTTAATATCCCTCCTGAAATGCATCAGTTTGGCTACACCAAAGTGCATTTGCGAAAAGGGCAGATTGATGCATTGGAGGATAGAAGAAAACAGGTTATGCAGGGAATACTTCTGGTTCAAAAATGGTTCCGTGGTCATCAAGCCCGTCTATATTTCCATGAACTTAAGAATGGAGTGACGACATTGAAATCATTTGCTCAAGGAGAAATTTTGAGGAGGAAATATGGTGTAGTTGAAAAGTCTTCTATGACTATTAATTGTAAAAATTTTGATGAGATTGAGGCAATCATACTGCTACAATCAGTAATTCGTGGCTGGCTGGCTAGGAGGAGGAATGCCAGTGGTTTGCATAAGGTGAAGAAACACCCTAATAACGAAAAACTTCAGAGGTATTCTCGTGTGAAGATGCTAGATATGAAGGTAGCGTCCAGAGAGCAGGTTCAGAATTTGCCTTCAGCTTTAGAAGAACTCCGAAGGCGGGTACTTAAGGCTGAGGCAACTCTTGAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAGCTGAAACAAAACCAATCAAAATGGGTTGAATATGAGGCGAGGATGAAATCAATGGAGGAGACGTGGCAGAAACAGATGGCATCTTTGCAAGTGAGTCTTGCTGCTGCTAGAAAAGGCCTTGCTTCTGACACCACCACTGCTTATCCTGGAAGACAAGAAGCTTTGTCACCTCGTTACAACGATTCTGAAGATTTTAACTCCATAATATCTCGAACTCCTGGTGGGAGCACACCTATCAAGTTTTCCAGCTCTCTCTCCGTCTCTGATTCTGGAGCTGCAGGCAGAGAAGTTAACGGCACACTTTCTGCAGTCAGCAATCTGATGAGGGAATTCGAACAGAGAAGACAGACATTCGATTGTGATGCCAGGGTTCTGCTTGATGCCAAGTCTGGGCAGTCTGTTATCACGAATCCGGATGAAGAACTCAGGAAACTTAAACATAGGTTCGAGGGATGGAAGAAAGAATACAAGCTTAGATTACGGGAGACGAAAGCAAGGCTTCATAAAGTAGGGAATTCAGAAGGGGAAAAGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3216 0.4235 MLESLQRRDEEENKPKDLPPALPARPTSKARLPSARRSLPNNFNFKVNGNPGETECLPNGFHDAIEETKRKVTVDLGHKRNGSLEMKKLKREVESPYALASEENQSDQISSKSRESISDDIFTYFIKKTHFLWHVHFCVRFFSQKLHVWCRQPNGHWGLGKIQSTSKEDASVLLTNGNVMKVARSKLLPANPDILKGVDDLIQLSYLNEPSVLHTLRFRYSQEMIYSKAGPILIALNPFKDVQICGNDHATTYRQRRMTDPHVYAVANAAYNEMMRDKVKQSIIISGQSGSGKTETTKIAMQYLAALGGGSCGVENKALPTHFILEAFGNAKTPRHNNSSRFGKYVELKFKPSRVVQLTSGERSFHIFYQLCAGSLPVLKERLNLREASEYKYLNQSDCMAIDGVDDAKMFNKLLKALDVVQICKEDQELVFKILAAILWLGNVSFQISDNENLVVVVDNEAVNSAAMLMGCSPQELIVTLSTCKVQAGKDTITRSLTLKQAIETRDALAQFMYESLFGWLIEKINKSLGAGKRHTGRSINILDICGFESFKKPSGILSLLDEESNLLKATDLTFANKLKQHLNANPCFKGERGRAFGVRHFAEEVSYDTNGFLQQNKDLLPSDYIRFLASCSCQLLQLFSKMHSQTQKQLNSLQMNVLDSQKQSVGAKLKGTEMYGFLLLEPNVIQDPLSISVAVLRQFNIPPEMHQFGYTKVHLRKGQIDALEDRRKQVMQGILLVQKWFRGHQARLYFHELKNGVTTLKSFAQGEILRRKYGVVEKSSMTINCKNFDEIEAIILLQSVIRGWLARRRNASGLHKVKKHPNNEKLQRYSRVKMLDMKVASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLKQNQSKWVEYEARMKSMEETWQKQMASLQVSLAAARKGLASDTTTAYPGRQEALSPRYNDSEDFNSIISRTPGGSTPIKFSSSLSVSDSGAAGREVNGTLSAVSNLMREFEQRRQTFDCDARVLLDAKSGQSVITNPDEELRKLKHRFEGWKKEYKLRLRETKARLHKVGNSEGEKSRRRWWGKLSSRAS 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0678 1071 ProSiteProfiles IQ motif profile. 732 760 IPR000048 GO:0005515
Lele30g0678 1071 Pfam IQ calmodulin-binding motif 735 752 IPR000048 GO:0005515
Lele30g0678 1071 Pfam IQ calmodulin-binding motif 793 810 IPR000048 GO:0005515
Lele30g0678 1071 Gene3D - 553 659 - -
Lele30g0678 1071 PRINTS Myosin heavy chain signature 226 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 PRINTS Myosin heavy chain signature 280 305 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 PRINTS Myosin heavy chain signature 323 350 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 MobiDBLite consensus disorder prediction 1048 1063 - -
Lele30g0678 1071 SMART iq_5 730 752 IPR000048 GO:0005515
Lele30g0678 1071 SMART iq_5 790 812 IPR000048 GO:0005515
Lele30g0678 1071 MobiDBLite consensus disorder prediction 1 18 - -
Lele30g0678 1071 Coils Coil 853 887 - -
Lele30g0678 1071 Gene3D - 673 730 - -
Lele30g0678 1071 Gene3D - 363 422 - -
Lele30g0678 1071 Gene3D Kinesin motor domain 199 548 IPR036961 -
Lele30g0678 1071 Gene3D Myosin VI head, motor domain, U50 subdomain 424 531 - -
Lele30g0678 1071 ProSiteProfiles Myosin motor domain profile. 196 673 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 SMART MYSc_2a 190 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 PANTHER MYOSIN 189 553 - -
Lele30g0678 1071 MobiDBLite consensus disorder prediction 1 43 - -
Lele30g0678 1071 FunFam Myosin heavy chain 363 419 - -
Lele30g0678 1071 MobiDBLite consensus disorder prediction 1048 1071 - -
Lele30g0678 1071 ProSiteProfiles IQ motif profile. 791 820 IPR000048 GO:0005515
Lele30g0678 1071 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 143 192 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 Pfam Myosin head (motor domain) 198 554 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele30g0678 1071 Gene3D - 733 820 - -
Lele30g0678 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 811 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0678 Lele-ChrLele30 11417514 11426469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0678 141 1067 Myosins gene family AT4G27370 46.435 0.0 871