Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0662 ATGGTGGCTGGAAATGATTTTCTAGTGGACCGTGGGAGGACATATTATGAGGCGTTGAAGAAGAGTGGGTGGGAAGGAGAGTTGGATATAGGAGGAAGCCATAAAATGTTAAAGCAGCTTGTGGAAAGGATAGATTTATTGGTACATGCTTCGATTGTAATGAATGTAATAATGCATGCATCAACGTGGGTGGTGTTTCAGGATCTTGTCAGGCCCATAACTTATTCTTTGGCCTCAGTTTCTGATTCCAAACTAACCGTTTCTAAAGGAAATAACAATAAGAAGAGAAAGTTCTCTCAGGATAACCTTCGTGCAAAGGTTAATATTCGCATAGCCTCGACAGATATGGCTGCCTCCCTTCTCAAGTTGTCTTCCTTCATCGCCTTCCTCTGCTTTGCCCTCTTGGTTTCCTCTCCCACTGAGAACGTTGAGGCTGCACTTTGTTCAAGGCTTAGCACTAAATTTTCTGGGATTTGCACCGACAGTGGTCACTGTAATAATGTGTGTCACAGCGAGGGGGCAGTTTCGGGAAGTTGTCACCAACATGATTTTGGATCTGCATGCTTTTGCTATAACAATTGCAAGAAGTGA 591 0.4349 MVAGNDFLVDRGRTYYEALKKSGWEGELDIGGSHKMLKQLVERIDLLVHASIVMNVIMHASTWVVFQDLVRPITYSLASVSDSKLTVSKGNNNKKRKFSQDNLRAKVNIRIASTDMAASLLKLSSFIAFLCFALLVSSPTENVEAALCSRLSTKFSGICTDSGHCNNVCHSEGAVSGSCHQHDFGSACFCYNNCKK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0662 196 Gene3D - 144 194 IPR036574 -
Lele30g0662 196 CDD Knot1 157 191 IPR003614 GO:0006952
Lele30g0662 196 PANTHER DEFENSIN-LIKE PROTEIN 1 125 192 - -
Lele30g0662 196 SMART gth_4 147 194 IPR003614 GO:0006952
Lele30g0662 196 SUPERFAMILY Scorpion toxin-like 146 194 IPR036574 -
Lele30g0662 196 ProSitePatterns Gamma-thionins family signature. 146 169 IPR008176 GO:0006952
Lele30g0662 196 Pfam Gamma-thionin family 147 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0662 Lele-ChrLele30 11259747 11263412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0662 125 194 Plant Defensins Gene Families AT1G19610 36.986 8.50e-09 48.9