Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0660 ATGATTGATAAAAGAAATAACGGGGGAAAAAATATTCGGAGGAGTTCGAGTTGCTTCTTCTTCTTCTTCGATCTACTTCACCGTGTATGTGTGAGAATGGGAGTTCCAGCAACCGACCCGCTTGCCCAACTGAGTCTTCCACCGGGTTTTCGGTTTTACCCTACCGACGAGGAGCTTCTGGTTCAATATCTATGCCGGAAAGTAGCCGGCCACCATTTCTCTCTGCAGATTATTGGTGAGATCGACTTGTACAAGTGCGACCCATGGGTCTTACCGAGCAAAGCGATTTTCGGCGAGAAAGAATGGTATTTTTTCAGCCCCAGAGACCGGAAGTACCCGAATGGGTCTCGACCCAACAGAGTTGCTGGTTCTGGGTACTGGAAAGCCACAGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGAATCAAGAAAGCTCTCGTTTTCTACGTAGGCAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGTCTTCTCGGCAATTCCAGAAAGAATGGTAGCTCCAAGCTTGATGATTGGGTTCTGTGTCGAATTTACAAGAAGAACTCGAGCGCGCAGAAGAATATGCTTTCAGGCGTTTCGAGCAAAGAATACAGTTACAGCAACGGGTCTTCTCCGTCGGCATCGTCCCAGTTGGACGACATGCTCGAATCATTGCCGGAGATCGAAGACCGCAGCTTCACCCTGCCGCGTGTGAACTCGTTCAAGGCGCTACCGCAAGACGAGAAGCTCAATTTCAATAATCTTGGCGCCGGAAATCTAATGGACTGGGCTAACCCGCCGGTACTTAACTCAGTACTCGACTTCGTTCCCGGAAGTCAGGCTCAGGGGATGGTGAATTACAACCCGGGAAATGACTTTTATGTCCCTTCGATCTCTCAGCTCTGCCACACGGGGTTGACGGCGCCGGCAGCACCGATGGAGAAGCTTGGGAAAACATTTGAGGAGGAGGTTCAGAGCGGGGCGAGGAACCGGGTGGAGAATGCTGGCGGGTACTTTCATCAGGCGAATTCGAATGTGGGTTCTCGAACTCCATAG 1077 0.507 MIDKRNNGGKNIRRSSSCFFFFFDLLHRVCVRMGVPATDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKCDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLGNSRKNGSSKLDDWVLCRIYKKNSSAQKNMLSGVSSKEYSYSNGSSPSASSQLDDMLESLPEIEDRSFTLPRVNSFKALPQDEKLNFNNLGAGNLMDWANPPVLNSVLDFVPGSQAQGMVNYNPGNDFYVPSISQLCHTGLTAPAAPMEKLGKTFEEEVQSGARNRVENAGGYFHQANSNVGSRTP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0660 358 ProSiteProfiles NAC domain profile. 46 194 IPR003441 GO:0003677|GO:0006355
Lele30g0660 358 SUPERFAMILY NAC domain 41 194 IPR036093 GO:0003677|GO:0006355
Lele30g0660 358 Gene3D NAC domain 55 200 IPR036093 GO:0003677|GO:0006355
Lele30g0660 358 FunFam NAC domain-containing protein 72-like 55 199 - -
Lele30g0660 358 Pfam No apical meristem (NAM) protein 47 171 IPR003441 GO:0003677|GO:0006355
Lele30g0660 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 45 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0660 Lele-ChrLele30 11230453 11231727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0660 33 344 NAC Transcription Factor Family AT4G27410 58.182 3.34e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g0660 NAM 7.7e-37 No_clan