Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0634 ATGTTTGGATGCTGGGAAAACTCCATGAGGTCTGTATTCAACATGTTTGCGGTGAAAATCCACTTTTACGAGGTTTTGAGGATCTGGGGTCTGTTGTGCATGATGGGTTGCTTTTGTTGTAAGCCCTCGGCCATTGATGACAGTAGGGAGAGTCCGAGGGAGCGATTATCGAATAAGGCTTCGTTGGACTCTCGTGGATCTAGGGCTACCTCATCGAGGAGGGAGGATGGATATGGAGTGAAGGATAGATATGATAATAATGATGGTAGAATTGCATCCATGGATAAACAAGGAAATGGCTCTGTTCGTTTACAAGTTGATAATTTTGAAAGGAAGAGGAAGAAAACAGAGTATGTTGTTGCACAGCATCCAGGAATTGGCAGTGTTCCAAAAGCGACAGAAGGGGAGCAGGTTGCAGCTGGGTGGCCTTCATGGTTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGACGAGCAGATTCTTTTGAGAAGTTGGATAAAATTGGTCAAGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTTGAACATAAGAAAATTGTTGCTTTGAAAAAAGTGCGGTTCGATAATCTTGAACCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAACGTTATAAAACTGGAAGGTCTAGTTACATCAAGGATGTCTTGCAGCCTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGACTAAAGTTTACAGAAGCCCAGGTCAAATGTTATATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCTTTGGTGTACTGCACCGTGACATTAAGGGATCCAACCTTCTGATCGACAACAACGGAATCTTGAAGATTGCAGACTTTGGTTTGGCAAGCTTTTATAATCCCAATCAAATTCAGCCATTGACTAGCCGAGTTGTCACGCTTTGGTATCGGCCTCCAGAACTCTTGCTTGGAGCAACTTACTATGGTGCTGCAGTAGATTTATGGAGTACAGGCTGCATACTTGCTGAGCTGTATGCTGGAAAGCCTATTATGCCAGGAAGAACTGAGGTTGAACAGTTACATAAAATTTTTAAACTTTGTGGCTCACCTTCTGAGGATTATTGGAGGAAATCGAAGCTACCTCATGCAACAATATTTAAGCCTCAACAACCCTACAGGCGGTGTGTTGCAGAAACATTTAACGAGTTTCCTGCACCTGCATTAGCACTCATGGAAACCCTTTTATCCATAGATCCTGCAGATCGTGGAACAGCAGCATCTGCTTTGAAGAGTGAGTTCTTCGCAACAAAACCCTTACCTTGTGATCCTTCAAGTTTGCCCAAGTATCCTCCGAGCAAGGAATTCGATGCCAAAGCGCGGGATGAAGAAGCTAGAAGACAAGGAGCTCTCGGAAGCATGGGCCATAGACAGGGGACGAGAGAGTCTCGGGCAGTCCCGGCACCTGATGCTAATGCTGAACTGGTCCTATCCATGCAGAAGAGACAAGGTCAATCCAACTCTAAGAGCCGTAGCGAGAAGTTTAATCCTCATCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCTAGGCCATCACAGGCTGTGGAAGTAGGTATAGATCACCAAGTACAGCAACATAAAAGAGCTTCCCATTCAGGTCCACTTTGTAACCGCACTGCATGGACGAAAGCTGGGAAAAACCCGGATGATGCCCCAAAGATATCCAATGGGGGTGACTTGTCAGCAATATCTGGCTTAGTCGCAGCAAGAAGGAGCTTGTTATCGGATGATCACAGAGAAAGGTCCGGATCATCACATGCAGAGGTTCCAAAACTAATAAGCCGGTTCCCAGGATCCTTGAAGGAGGCCTCTGAATCATTGATGCAACATGAAAAGAAGCATGCTGGAGCTCCTCCTCCAAATGAAGAAGGGAGAGGCAGCAACAAAGACCCAATTCCTGTTGGTTATGGGTCAAAGGGCCATAAAATTCATTATTCTGGCCCATTGTTAGTTCCATCTAGCAACACGGATCAGATGTTGAAGGACCACGATCGCCAGATTCAAGAAGTCGTCAGAAGAGCGCGATTGGACAAGGCAAAGATGAGAAGACTTCAAGCTGAAGGGAACAACCAGATAACTACCAATTCATTATTTGTTTCTGGTCGCTGA 2217 0.4551 MFGCWENSMRSVFNMFAVKIHFYEVLRIWGLLCMMGCFCCKPSAIDDSRESPRERLSNKASLDSRGSRATSSRREDGYGVKDRYDNNDGRIASMDKQGNGSVRLQVDNFERKRKKTEYVVAQHPGIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEHKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSFGVLHRDIKGSNLLIDNNGILKIADFGLASFYNPNQIQPLTSRVVTLWYRPPELLLGATYYGAAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFNEFPAPALALMETLLSIDPADRGTAASALKSEFFATKPLPCDPSSLPKYPPSKEFDAKARDEEARRQGALGSMGHRQGTRESRAVPAPDANAELVLSMQKRQGQSNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVEVGIDHQVQQHKRASHSGPLCNRTAWTKAGKNPDDAPKISNGGDLSAISGLVAARRSLLSDDHRERSGSSHAEVPKLISRFPGSLKEASESLMQHEKKHAGAPPPNEEGRGSNKDPIPVGYGSKGHKIHYSGPLLVPSSNTDQMLKDHDRQIQEVVRRARLDKAKMRRLQAEGNNQITTNSLFVSGR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0634 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Lele30g0634 738 SMART serkin_6 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0634 738 CDD STKc_CDK9_like 165 449 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 639 667 - -
Lele30g0634 738 ProSitePatterns Protein kinases ATP-binding region signature. 171 194 IPR017441 GO:0005524
Lele30g0634 738 MobiDBLite consensus disorder prediction 68 90 - -
Lele30g0634 738 SUPERFAMILY Protein kinase-like (PK-like) 159 457 IPR011009 -
Lele30g0634 738 Coils Coil 703 723 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 641 655 - -
Lele30g0634 738 PANTHER CELL DIVISION PROTEIN KINASE 163 455 - -
Lele30g0634 738 FunFam probable serine/threonine-protein kinase At1g54610 152 247 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 47 61 - -
Lele30g0634 738 Gene3D Transferase(Phosphotransferase) domain 1 248 487 - -
Lele30g0634 738 ProSiteProfiles Protein kinase domain profile. 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0634 738 Pfam Protein kinase domain 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0634 738 MobiDBLite consensus disorder prediction 47 97 - -
Lele30g0634 738 FunFam probable serine/threonine-protein kinase At1g54610 248 488 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 468 484 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 455 544 - -
Lele30g0634 738 MobiDBLite consensus disorder prediction 512 526 - -
Lele30g0634 738 Gene3D Phosphorylase Kinase; domain 1 152 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0634 Lele-ChrLele30 11014334 11020348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0634 157 481 Core Cell Cycle Gene Families AT5G10270 54.545 2.22e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele30g0634 Pkinase 2.4e-68 CL0016