Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0623 ATGGTGGTTCTGAGATATTTCTTGATGAGTTTTCTCCAATGGGGGTTCTTGGCTTGCTTTATTTGTTTATCTATGGGTCTGAAAACCTCAACACAATCATCTTGTGACCCTCGTGATCTGTTGGCTCTGAGGCAATTTGCTGGAAACCTCACAAATGGGTCTATTATCACATCATGGTCCACTGATACTGATTGCTGCAGTTGGGTTGGTGTTATCTGTGATAATTTGACTGATAATGAGACAACAACTGGTAATAGAGTGGCCAAGTTGATTCTTCATCAAATGGGACTCAAAGGGGTAATTTCTACTTCTCTAGCACAATTAGATTACTTAATTGTGCTGGATCTTTCGTTCAATCATCTCCAAGGTGCGTTGCCTGCAGAATTCTCCAAGTTGAAGCTGTTGAAATTTCTGGATTTGAGTCATAATATGCTGTCAGGACCTGTTGTTGAAGCTCTTTCTGGTTTGCAATCTATTCAGACACTCAACATTTCCAGCAATTCAATTGGTGGAAACCTCTCTGAGCTTGTTGGGGAATTTCCTCATCTTGTTGCATTCAACATAAGCAACAATTCATTCAACGGCCAGTTCAATTCTCAAATGTGCAATTCCTCTAAAGGGCTTCATGTGCTTGATTTATCCGCGAATCGCATCGCCGGTGGTCTTGAAGGCTTGGACAAATGCAACACATCTCTTCAGGAGTTGCATTTGGATAATAATCTATTTTCAGGCCCTCTTCCTGATGCCTTGTATTCATTGTCAGCCTTGGAGCAATTCTCAGTGTCTGTGAACAATTTCTCTGGTGAATTAAGCACGAAACTAAGTAAGCTCTCTAGTCTAAAGTCTATAGTGATTTCTGGGAACCAGTTTTCTGGGGCACTCCCAAATGTGTTTGGGAATTTGTCAGATTTAGAACAATTATCAGCACACACCAATTCATTTTCTGGGCCATCGCCATCTAGCTTGGCTTTATGCTCAAAGCTTCGGGTGCTCGATCTTCGAAATAATTCTCTGGCGGGTCGAATTGATCTTAATTTCACTGGATTGACTAATCTGCGTAACCTTGATCTTGCATCTAATCATTTTACTGGCCCTCTTCCAAGCTCCTTGTCTTATTGCCGCGAATTGAAAGTTTTGAGCCTTGCTAAGAATGGGTTGACTGGTTCAATTCCTGAAAACTATGCGAACCTTTCATCGCTGTTCTTTCTGTCTTTGTCAAACAACAGCTTAGAGAACTTATCCGGGGCCCTGTCAGTGCTACAGCATTGTAAAAACCTCACTACACTCATCCTCACAAAGAATTTCCATGGTGAGGAAATACCGAGAAGTGTTTCGGGCTTTGAGAGCCTTATGGTTTTAGCACTGGGAAATTGTGGTCTCAAAGGCCAGGTCCCTGCTTGGCTATTGAATTGCAGCAAATTGGGGGTCCTCGACTTGTCTTGGAACCGTTTGGAAGGTAATATCCCTTCTTGGATTGGTAAGATGGACAATTTGTTCTACCTGGATTTCTCGAACAATTCTTTCATGGGAGAAATGCCAAAAAGTATGACACAGTTGAAGGGTCTCGTATCCCCAAATTGCACTAGACCGAATCTGTCTGCATCCGCCGGTGTTCCTCTCTATGTTAAGAGAAACAAGAGTGTTAATGGGCTGCAATATAACCAGGCTTCAAGTTTCCCTCCTTCATTATTACTGAGCAATAACAGATTGAGTGGAGTGATATGGCAAGAAATCGGGCAACTCAAAGCGCTGCATGTCTTGGATTTAAGCAGGAATGAAATCTCTGGTACAATTCCTAGCAGTATTTCAGAGATGGAGAACTTGGAAACACTAGATCTATCATATAATGATCTCTATGGAGTGATCCCTCCATCATTTAACAACCTCACGTTCTTGTCGAAGTTCAGCGTGGCTTATAATCACTTGCGGGGACAAATTCCAACCGGGGGGCAGTTTCTAAGCTTTTCTAGTACAAGTTTTGAGGGCAACCCGGGACTTTGTGGTGCAATAATTTCTCCGTGTAAAACCAGCAATATGGGATGGAGGTCCAATATGCCTTCTGGTTCTTCCAGCAGATTTGGTAGAAACAATGTCCTTGGTATAACAATCAGTATAGGTGTAGGGCTTGCCCTGCTTCTTGCCATTGTTCTGCTAAAAGTATCTAAAAGGGATGAAGAGAAGCCGGTTGAAAACTTTGATGAGGAATTGGGCAGGCCCCCCAGGTTATCTGAAGGACTTGTTTCTTCGAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTGCTGATTTGTTGAAATCCACAAACAATTTTAACCAGGCAAACATTATCGGTTGTGGCGGGTTCGGTCTGGTGTACAAGGCAAATCTTCCAAATGGCATGAAAGCCGCAGTCAAGAGACTTTCCGGGGACTGTGGTCAGATGGAGCGTGAATTCCAAGCTGAAGTAGAGGCCCTTTCCAGAGCTCAGCACAAGAACCTTGTTTCTCTTAAAGGTTATTGCCGGCACGGCAATGTCAGATTGTTAATTTATTCCTACTTGGAGAATGGAAGTTTGGATTACTGGCTGCATGAGTGTGTAGATGCAAATTCAGCTCTGAAATGGGACGTGAGACTCAAGATCGCAAAAGGCGCAGCTCATGGATTAGCTTACTTGCATAAGGGGTGTGAGCCATTCATAGTTCATCGAGACGTTAAATCTAGCAATATACTTCTGGATGATAAATTTGAAGCTCGTTTGGCTGATTTTGGCCTTTCAAGGCTACTTCAGCCTTATGACACCCATGTTACAACAGATTTAGTGGGCACATTGGGATATATTCCGCCGGAGTATAGCCAGACATTAACAGCAACCTTCAGGGGCGATGTCTATAGCTTTGGCGTTGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCGGTAGAAGTCATCAAGGGTAAAAACTGCAGGAACCTGGTATCTTGGGTGTTCCAGATGAAATCCGAAAACAAGGAGCAAGAAATTTTCGACCCAGCCATCTGGGACAAGGATCATGAGAAGCAGCTCTTGGAGGTACTGGCCATCGCTTGTAGATGTTTGGACCAGGAACCAAGGCAAAGACCCTCTATCGAAGAAGTTGTTTTGTCGCTCGATCACATTGGGGCTGATGGTTCACAACAATGA 3168 0.4337 MVVLRYFLMSFLQWGFLACFICLSMGLKTSTQSSCDPRDLLALRQFAGNLTNGSIITSWSTDTDCCSWVGVICDNLTDNETTTGNRVAKLILHQMGLKGVISTSLAQLDYLIVLDLSFNHLQGALPAEFSKLKLLKFLDLSHNMLSGPVVEALSGLQSIQTLNISSNSIGGNLSELVGEFPHLVAFNISNNSFNGQFNSQMCNSSKGLHVLDLSANRIAGGLEGLDKCNTSLQELHLDNNLFSGPLPDALYSLSALEQFSVSVNNFSGELSTKLSKLSSLKSIVISGNQFSGALPNVFGNLSDLEQLSAHTNSFSGPSPSSLALCSKLRVLDLRNNSLAGRIDLNFTGLTNLRNLDLASNHFTGPLPSSLSYCRELKVLSLAKNGLTGSIPENYANLSSLFFLSLSNNSLENLSGALSVLQHCKNLTTLILTKNFHGEEIPRSVSGFESLMVLALGNCGLKGQVPAWLLNCSKLGVLDLSWNRLEGNIPSWIGKMDNLFYLDFSNNSFMGEMPKSMTQLKGLVSPNCTRPNLSASAGVPLYVKRNKSVNGLQYNQASSFPPSLLLSNNRLSGVIWQEIGQLKALHVLDLSRNEISGTIPSSISEMENLETLDLSYNDLYGVIPPSFNNLTFLSKFSVAYNHLRGQIPTGGQFLSFSSTSFEGNPGLCGAIISPCKTSNMGWRSNMPSGSSSRFGRNNVLGITISIGVGLALLLAIVLLKVSKRDEEKPVENFDEELGRPPRLSEGLVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKANLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNVRLLIYSYLENGSLDYWLHECVDANSALKWDVRLKIAKGAAHGLAYLHKGCEPFIVHRDVKSSNILLDDKFEARLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVFQMKSENKEQEIFDPAIWDKDHEKQLLEVLAIACRCLDQEPRQRPSIEEVVLSLDHIGADGSQQ 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0623 1055 Gene3D Transferase(Phosphotransferase) domain 1 850 1050 - -
Lele30g0623 1055 SMART LRR_typ_2 132 155 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 397 420 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 277 300 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 349 373 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 581 604 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 108 131 IPR003591 -
Lele30g0623 1055 SMART LRR_typ_2 605 628 IPR003591 -
Lele30g0623 1055 CDD STKc_IRAK 780 1042 - -
Lele30g0623 1055 PRINTS Leucine-rich repeat signature 135 148 - -
Lele30g0623 1055 PRINTS Leucine-rich repeat signature 605 618 - -
Lele30g0623 1055 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Lele30g0623 1055 FunFam Leucine-rich repeat receptor-like protein kinase 850 1055 - -
Lele30g0623 1055 Gene3D Phosphorylase Kinase; domain 1 743 849 - -
Lele30g0623 1055 Pfam Leucine rich repeat 87 145 IPR001611 GO:0005515
Lele30g0623 1055 Pfam Leucine rich repeat 350 410 IPR001611 GO:0005515
Lele30g0623 1055 Pfam Leucine rich repeat 562 618 IPR001611 GO:0005515
Lele30g0623 1055 Gene3D Ribonuclease Inhibitor 298 680 IPR032675 -
Lele30g0623 1055 PANTHER UNNAMED PRODUCT 229 977 - -
Lele30g0623 1055 Pfam Leucine Rich Repeat 327 346 IPR001611 GO:0005515
Lele30g0623 1055 SUPERFAMILY Protein kinase-like (PK-like) 755 1045 IPR011009 -
Lele30g0623 1055 SUPERFAMILY L domain-like 60 340 - -
Lele30g0623 1055 Gene3D Ribonuclease Inhibitor 34 296 IPR032675 -
Lele30g0623 1055 ProSiteProfiles Protein kinase domain profile. 774 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0623 1055 ProSitePatterns Protein kinases ATP-binding region signature. 780 802 IPR017441 GO:0005524
Lele30g0623 1055 SUPERFAMILY L domain-like 318 667 - -
Lele30g0623 1055 SMART LRR_sd22_2 397 415 - -
Lele30g0623 1055 SMART LRR_sd22_2 132 155 - -
Lele30g0623 1055 SMART LRR_sd22_2 205 227 - -
Lele30g0623 1055 SMART LRR_sd22_2 325 357 - -
Lele30g0623 1055 SMART LRR_sd22_2 581 610 - -
Lele30g0623 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Lele30g0623 1055 FunFam Tyrosine-sulfated glycopeptide receptor 1 346 679 - -
Lele30g0623 1055 Pfam Protein kinase domain 775 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0623 1055 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 74 307 - -
Lele30g0623 1055 SMART serkin_6 774 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0623 1055 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lele30g0623 1055 FunFam Phytosulfokine receptor 1 738 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0623 Lele-ChrLele30 10914775 10917942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0623 40 1055 Receptor kinase-like Gene Family AT1G55610 33.067 7.95e-166 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele30g0623 Pkinase 4.5e-44 CL0016