Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0618 ATGGCTGATGCAGCTGGTCTAGCTGAGGCAGCAGGATCAAGGTTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAAATTGATGACATTCAAACGGAAATTGCTGTTCTATCACAATGCCGTTGTCCATATATTACCGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCTGACCTACTCCAATCAGGGCATCCCCTTGATGAAGTGTCAATCGCTTGCATTTTACGTGACATGTTGCATGCTATTGATTATTTGCATGCTGAAGGAAAAATTCATAGAGACGTCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGACGTAAAGGTTGCAGATTTTGGTGTTTCTGCGCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAGTTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTTCATCCTATGAGAGTGCTTTTCATCATACCCCGTGAGAACCCACCACAGCTAGATGAACATTTTTCTCGTCCCATTAAAGAATTCGTTTCGTTGTGTTTAAGAAAGCTTCCAGCTGAGGCAAGGATCTATGCCATTCCCACTCTTACTGCTGGTTCACTTTCTTTTTTGTTTTCCTCCCTATTGAGCATATAGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAAAAGAAGTGGGGACACCTAGAAGTGGTCCAAGAGGGATAGGGGAGCCATCTGATACGATGAAAGTGGCAAGAGATTTTAGAGAAGAGGCTACTCAAACCATTCGCAGTGGTCAGGATAAAACCCTGAAGAATTCTGGATGGGACTTCAGCATTGGTGGATCAGAGGGTACTGGAACTTTTCGCAGTGTTGCACGACCACCTCAGCATAGAGATAAGAAAACAGATGTTTCACAATATCAACTTGACCAAAAGAAGGCAACACAGAGTGGCTATCTTGGGGCATCTTCCTATAAAAGTTCTCTTTATGAATCACTAGAAACTTCCCTTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACAATCATCGCTCCTTCATGACCAAAGATCCCTGTCTAGCAGTAGCTATGCTTCTTTTGAAGATAATTCTTCCAGTGGAACTATTGTTGTCCGTCGTCAGCATGATGATTATGACTCTTCACAGACAATGAGGTCAAGGCTGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGCCTCAAATCTTGCAGAGGCAAAAGCTGCTATGCTAAGACCAAGGAAAGGAAATACTCGAGAGAGAGTTACACAGGGAAAGACTGGCAATGATGTGCAAGAAAGCAGAAGGGACCAAGTGACAGGCAACTCTGATTTCTCAAGAGCATCTCGTGTAAACAATGGTCCACAACAGGGAATTTCAAGAGTGCGCCCCTCTGATGATGATCAAGACAAAGTCAGAATATTGTCATCCTCTGTGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCTGATGATCCAGAGGGGTCTACCATACAAGAAATAATCGATTCACTCAAACACATGGAGCACATAAAGTCTGGATCATGTGATGCTCTTGTCAAAAAGTTGCTTCAGCGATTGGCTAGTTCGAAGGAATCTTCAGTGAAGGATCTGCAGGAGCTAGCAGCTCAATTATTTACTAAGACCAAGTCAGCTCTTGAAGAATCCCAAAATACAACTGCAGAAGTTGATGCCAGGAAGAAACAACAGAACAGAGAACTTCATGCCAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAAGTCAAGCCTAA 2112 0.4252 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGHPLDEVSIACILRDMLHAIDYLHAEGKIHRDVKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTVEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLRKLPAEARIYAIPTLTAGSLSFLFSSLLSIXPSAKELLKHRFIRTARKSPKLLERIRERPKYQIKEVGTPRSGPRGIGEPSDTMKVARDFREEATQTIRSGQDKTLKNSGWDFSIGGSEGTGTFRSVARPPQHRDKKTDVSQYQLDQKKATQSGYLGASSYKSSLYESLETSLEDDELSGNGSGTVVIRSPKGSQSSLLHDQRSLSSSSYASFEDNSSSGTIVVRRQHDDYDSSQTMRSRLGLNERTANASLEDSASNLAEAKAAMLRPRKGNTRERVTQGKTGNDVQESRRDQVTGNSDFSRASRVNNGPQQGISRVRPSDDDQDKVRILSSSVALSVLLIPSLKEAFADDPEGSTIQEIIDSLKHMEHIKSGSCDALVKKLLQRLASSKESSVKDLQELAAQLFTKTKSALEESQNTTAEVDARKKQQNRELHANSNLGPLARFLLSRWQSQA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0618 703 ProSiteProfiles Protein kinase domain profile. 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0618 703 MobiDBLite consensus disorder prediction 347 369 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 469 571 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 484 504 - -
Lele30g0618 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele30g0618 703 Gene3D Transferase(Phosphotransferase) domain 1 12 317 - -
Lele30g0618 703 FunFam serine/threonine-protein kinase dst1 isoform X1 12 265 - -
Lele30g0618 703 Coils Coil 661 681 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 347 394 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 421 451 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 423 451 - -
Lele30g0618 703 SMART serkin_6 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0618 703 Coils Coil 48 68 - -
Lele30g0618 703 MobiDBLite consensus disorder prediction 526 566 - -
Lele30g0618 703 Pfam Protein kinase domain 16 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0618 703 MobiDBLite consensus disorder prediction 377 391 - -
Lele30g0618 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 656 - -
Lele30g0618 703 SUPERFAMILY Protein kinase-like (PK-like) 12 254 IPR011009 -
Lele30g0618 703 CDD STKc_MST3_like 13 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0618 Lele-ChrLele30 10874789 10883443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0618 1 703 MAP Kinase Kinase Kinase Kinase AT3G15220 58.726 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lele30g0618 Pkinase 8.3e-62 CL0016