Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0613 ATGGCTCCTAGGGATAGACCCGCCTCTCTTGCCCCCTCTAATCCGTCCAACCCTGCCAAGGAGATCCGATACAGAGGTGTCCGCAAGAGGCCATGGGGGCGTTACGCCGCTGAGATTCGTGATCCCTGCAAGAAAACCCGTGTTTGGCTTGGCACTTTTGATACCGCTGAGGAGGCGGCGCGTGCTTACGACACGGCGGCCAGAGAGTTCCGTGGCGCTAAGGCCAAGACTAATTTCCCGGTTCCCTCTGAACTTGCGAACAACTTCAGTCGCAGCCCTAGCCAGAGCAGCACGCTTGAGTCGTCATCGCCGCCGCCAGTTGCTCCTCCGCCACTAGAACTCTCCCTTGGGTCGCTCACTTCCGGCGGTAGCGCGTTGGGGTTCCCGCTCATTCCGGTGGGTCGCCCGGTTATGTTTTTTGATGCGTTTGCTAGGGCTGACAGCATGATGGAGGCTGCGGCCGGCCGCCGTGACATGTGCGGGTTTAATCGGCCCGTTGCGGAGTTCCGCCACTCCGTTGTCGTCGGCGATGGTGGTGCGCACAGTGACTCTGATTCGTCCTCTGTCGTGGACTACGAGCGTTCTTCGCCTCGAACAGTCTTAGATCTTGACCTTAACGTTCCTCCTCCGGCTGAGGTTGCCTGA 645 0.5969 MAPRDRPASLAPSNPSNPAKEIRYRGVRKRPWGRYAAEIRDPCKKTRVWLGTFDTAEEAARAYDTAAREFRGAKAKTNFPVPSELANNFSRSPSQSSTLESSSPPPVAPPPLELSLGSLTSGGSALGFPLIPVGRPVMFFDAFARADSMMEAAAGRRDMCGFNRPVAEFRHSVVVGDGGAHSDSDSSSVVDYERSSPRTVLDLDLNVPPPAEVA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0613 214 MobiDBLite consensus disorder prediction 81 115 - -
Lele30g0613 214 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lele30g0613 214 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele30g0613 214 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele30g0613 214 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Lele30g0613 214 MobiDBLite consensus disorder prediction 81 102 - -
Lele30g0613 214 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele30g0613 214 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lele30g0613 214 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lele30g0613 214 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 192 - -
Lele30g0613 214 MobiDBLite consensus disorder prediction 1 25 - -
Lele30g0613 214 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Lele30g0613 214 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0613 Lele-ChrLele30 10852722 10853366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0613 17 141 AP2-EREBP Transcription Factor Family AT3G15210 66.187 6.15e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele30g0613 AP2 1.9e-14 CL0081