Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0611 ATGGACCCCTATTACCCCACCTCCGACCACAACAACAACGATGCTCATTTGCCTCCTGGCTTTCGCTTTCACCCTACTGACGAAGAACTCATCACTTACTACCTCCTCAAGAAAGTCCTTGACAATAGCTTCACTGGTAGAGCCATCGCTGAAGTTGATCTCAACAAGTGTGAGCCATGGGAGCTTCCAGAGAAAGCGAAGATGGGAGAGAAGGAGTGGTACTTCTTTAGTCTGAGAGATAGGAAGTACCCAACTGGGCTAAGAACAAATAGGGCTACAGAAGCAGGATACTGGAAAGCTACTGGGAAGGACAGAGAAATTTATAGCTCAAAGACTTGTTGTTTAGTTGGGATGAAGAAGACTCTTGTGTTTTATAGAGGAAGGGCTCCAAAAGGCGAGAAGAGTAACTGGGTTATGCACGAATATCGCCTTGAAGGCAAATTTGCTTACCATTACCTGTCTCGCTCCTCCAAGGATGAGTGGGTCATTTCCCGAGTTTTCCAGAAGAGTGGCTCCGGCAATGGCGGCGGCGGCTCCTCCGCGATATCCTCCTCTTGTAGTGGCTCAAAGAAGACCCGAAACATCATCAGCTCTTCTTCTAACTTGAGTCTTTATCCGCCTGAGCCTAGTTCTCCCTCCTCCGTCTACCTTCCACCTCTGCTTGATTCCTCTACGTTCTCGGCCTCCGCCGCCTCCGTAAGCAGCACCGCCGCACTCAACGATCGTGACAATTGCTCTAATGCTTTCGACAGCTTGAATACCCCAAGAGAGCACGTGTCCTGTTTCTCCACAACAATATCTGCCACCGCCAGCAACAACTACAGCTTTGACCTGCCCGCCCCACCACCGTCTGTTACGGTGGATCCCTTTGCTCGTTTTCAGAGAAACGGGGGCGTCTCCTCCTTCCCGAGCCTGAGGTCGCTGCATCTTCAAGACAACCTTCAGCTTCCCTTCTTTATCCCTCCGCTTCCGCTGACGCAGCAGCCCTTCCAGGGCGTTCCCGTCGACATGAACTGGGCTACACCGGTTGACGAGCAGAAAGTGGCGGACGTTAGCTCCGGCATGACCGGTTTGGGTGGCTCCGAGCTCGATTGCATGTGGGGATTCTAA 1110 0.5198 MDPYYPTSDHNNNDAHLPPGFRFHPTDEELITYYLLKKVLDNSFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCCLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSGSGNGGGGSSAISSSCSGSKKTRNIISSSSNLSLYPPEPSSPSSVYLPPLLDSSTFSASAASVSSTAALNDRDNCSNAFDSLNTPREHVSCFSTTISATASNNYSFDLPAPPPSVTVDPFARFQRNGGVSSFPSLRSLHLQDNLQLPFFIPPLPLTQQPFQGVPVDMNWATPVDEQKVADVSSGMTGLGGSELDCMWGF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0611 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 236 - -
Lele30g0611 369 FunFam NAC domain-containing protein 100-like 26 173 - -
Lele30g0611 369 ProSiteProfiles NAC domain profile. 17 169 IPR003441 GO:0003677|GO:0006355
Lele30g0611 369 SUPERFAMILY NAC domain 6 169 IPR036093 GO:0003677|GO:0006355
Lele30g0611 369 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Lele30g0611 369 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0611 Lele-ChrLele30 10821108 10823053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0611 1 369 NAC Transcription Factor Family AT5G53950 54.731 1.23e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g0611 NAM 6.3e-41 No_clan