Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0603 ATGGGTAGGCCACCCAGTAACGGAGGCCCTGCCTTCCGCTTTACTCAAGCTGAGGTTGCAGAAATGGAAGCAATTTTGCAAGAGCATAATAATGCTATGCCAGCACGTGATGTTATTGCAGCTCTTGCAGAGAAGTTCAGTGAATCTCCTGATCGTAAAGGAAAGATTACTGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAAAGGTATGCTATTAGGGCAAAATCTAGTAAGGCTCCTGGAAAGTTAAGTATCACTCCTATGGTTCGAGAAGATTCAACCCCAGTTAGAAATATGCCTCAACCAATGGCTACTCCTATACCTCCTGCTTCAGTTTCAACAGGAAAAGGTGCTCCAGAAAACTCAGCAATGGAGTTTGAAGCTAAGTCTGGAAGGGATGGAGCATGGTATGATGTTGCAAACTTCCTATCCCACAGGCATTTGGAAACCAGTGATCCGGAAGTTCTGGTCCGATTTTCTGGTTTTGGACCTGAGGAGGATGAGTGGATTAATGTGCGAACAAATGTTCGGCCCCGCTCTCTGCCATGTGAATCATCAGAATGTGTGGCAGTTCTCCCTGGGGATCTCATACTGTGTTTCCAGGAAGGTAAGGAACAGGCTCTTTACTTCGATGCTCATGTCCTTGATGCTCAAAGACGGAGGCACGATGTTAGAGGCTGTCGTTGTAGATTTCTGGTCCGTTATGATCATGATCAATCAGAGGAAATTGTTCCGCTTAGGAAGGTTTGTCGTAGGCCCGAGACTGATTACAGGTTACAACAACTTCATGCTATGAATGAGGCAACACCTGTGGACCAGCAGAGGACCGGCATGGACTTAACGCCTGCGCATGCTGTCAGGGTTACAAGCTCAGCTGAAACAGTGCCAAAACAGCAGAGTGCAAACATTGCCATCGCCCCACAAAGAAAAGCTGAAGTAGCCAATGATATGACAGGAGGAAACGCCATCCGCCCCAGCGGTACTGTGTTTACCACCGGTGTCATTACCAGCAGCGTTCCTCCTAGTGGTATGGCATTTCCCGGCAATGTTACGATCAGTAGTGGTACAGCGTTTCCCAGCAATGTTGTTGTTATAAGCAGTGTTCCAGTAGTTTCAAATCAGAATCTGGCTGAAGGAAAATGA 1149 0.4674 MGRPPSNGGPAFRFTQAEVAEMEAILQEHNNAMPARDVIAALAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKAPGKLSITPMVREDSTPVRNMPQPMATPIPPASVSTGKGAPENSAMEFEAKSGRDGAWYDVANFLSHRHLETSDPEVLVRFSGFGPEEDEWINVRTNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAMNEATPVDQQRTGMDLTPAHAVRVTSSAETVPKQQSANIAIAPQRKAEVANDMTGGNAIRPSGTVFTTGVITSSVPPSGMAFPGNVTISSGTAFPSNVVVISSVPVVSNQNLAEGK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0603 382 SMART HOX_1 7 81 IPR001356 GO:0003677
Lele30g0603 382 CDD homeodomain 13 75 IPR001356 GO:0003677
Lele30g0603 382 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
Lele30g0603 382 Gene3D - 185 257 - -
Lele30g0603 382 Gene3D - 10 84 - -
Lele30g0603 382 Gene3D - 123 184 - -
Lele30g0603 382 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 307 IPR039276 -
Lele30g0603 382 Pfam SAWADEE domain 125 252 IPR032001 GO:0003682
Lele30g0603 382 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0603 Lele-ChrLele30 10764883 10770390 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele30g0603 SAWADEE 5.8e-40 CL0049