Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0567 ATGGCAGGTGTTGGACCTCTTACTCAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCGCCAACAGCGGCGGCGAAGAAAGATGAGAAAGCTGTCAACGCCGCTCGTCGCTCCGGCGCCGATATTGAAACCCTAAAAAAATTTAATGCTGCGACAAATAAAGCAGCCTCCAGCAGCACTTCTTTAAACACAAGGAAGCTTGATGAAGAAACTGAGAATCTTCATCATGAACGGGTACCAACTGAATTAAAGAAAGCCATCCAGCAGGCTAGGATGGAGAAAAAGCTTACCCAGGCTCAACTAGCTCAGATGATAAATGAGAAGCCTCAAATTATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAGATATTAGGTAAACTGGAGAGAGCTCTTAGCGCAAAACTGCGTGGAAAGAAATGA 429 0.4592 MAGVGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIETLKKFNAATNKAASSSTSLNTRKLDEETENLHHERVPTELKKAIQQARMEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQILGKLERALSAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0567 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 134 IPR001387 -
Lele30g0567 142 MobiDBLite consensus disorder prediction 65 81 - -
Lele30g0567 142 CDD HTH_XRE 85 134 IPR001387 -
Lele30g0567 142 FunFam Multiprotein bridging factor 1 71 142 - -
Lele30g0567 142 Pfam Helix-turn-helix 87 134 IPR001387 -
Lele30g0567 142 Coils Coil 87 107 - -
Lele30g0567 142 MobiDBLite consensus disorder prediction 51 81 - -
Lele30g0567 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 136 IPR010982 GO:0003677
Lele30g0567 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lele30g0567 142 Gene3D - 71 142 IPR010982 GO:0003677
Lele30g0567 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Lele30g0567 142 SMART mbf_short4 86 141 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0567 Lele-ChrLele30 10466951 10470005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele30g0567 MBF1 6.7e-25 No_clan