Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0553 ATGGAGTTATTAGCGATTCCAAGCTCTAAACTGTTGGGTGTGTTCGCATTGGGATTCTTCGCTCTGAATGTTTTCACAGAATATGGATCTAACGCTCAGAAGATACCAGATCATGAAGTGAGGGCTCTACAAGCAATATCATCAAAGATGAAGGACTTGAATTGGAAGGTAAGCCCAAATTCTTGTATGGATGGAGGCTTCAGAAATAAGAGCATTGTAGGAGACGACATCATTAGAAATGTTACCTGCAATTGCACCTTCTCCAGTGGAAAAGTTTGCCATGTTTCACATATCCAACTGAAGGGTCTCAATCTAAGTGGAGTTATACCAAGTGAATTTGGTAATCTTACTCAACTCCAAGAACTTGATTTGACTCGCAACTATCTGAATGGCTCAATTCCAAAGAGTTTTGCTAACCTTCCTCTTGTTGCAATATCCCTTCTGGCTAATCGACTCAGTGGCTCGATTCCAAAGGAAATCGGCGAAATTTCAACTTTGGAGGACCTAGTGTTGGAAAATAATCAATTAGAAGGAACTCTTCCTTCTAATCTCGGAAAATTGAAGCGGTTACGCAGATTGCTTCTTTCTGCAAATAATTTCTCAGGGACCATACCTGAAAGTTTTGGCAATCTAAAGAAACTAGAAGATTTTAGGTTAGATGGAAACAACATGTCAGGAAAATTACCCAGTTTTATTGGCAACTGGACCAGTCTTAATAGATTGGATTTGCAGGGAACTTCCATGGAAGGTCCAATTCCTCAAACAATATCTTCGTTAAAAAATTTGACTCAGTTGAGAATATCTGACTTGAATGGAAAAACAACAATGAGATTTCCTGATTTAAAGAACTTGAAATCCTTGAAACAATTAGTGTTGAGAAATTGCTCAATCACTGGTTCCATTCCGGATTACATTGGTCAAATGGAAGGCTTAGTTACTTTAGATTTGAGCTTCAACAAGTTGACTGATGGAATCCCAGATGAAATACAAGACTTGAAAAAACTAGATTACATGTTTCTGACTCAAAATTCTTTTAGTGGAGCAATTCCAGGATGGATACTAGCAAACAAACATAACTTGGATTTATCTTACAACAATTTTTCAAAGACTTCTGCTACCATTTGCCAATTCAAGGATGTAAACTTGGTTTCGAGCCTCTCATCTTCTGCAAAGACCTCAACTACTTGCCTGAAAAAGAACCTTCCTTGTGCAGGAAAACCCAAATATCATTCATTGTTCATAAACTGTGGAGGATCAGAAATGCATGATGATAAGGGAAATGAGTATGAAAGTGACCTTAGTCAAGAGGGTATCTCATTCTTTAGTTCTATCGCCGACAAATGGGCTTACAGCAGCACGGGATCATTCGTAGGAAATGCTAAAGCTGATTACGTTGCAAGAAATACATTTTCTCTCAACATTACTGGTCCAAGCTTCTACCAAACAGCTCGCCTTTCGCCGTTGTCCCTCAAGTATCATGGCCTTTGTTTGCTTAATGGGAATTATAATGTCAGGCTTCACTTTGCTGAGATTATGTTTTCTAATGACCAAACATTCAGCAGACTTGGGAGGCGCATATTCGATGTTTCAATTCAAGGTAGAAAATATTTGAGTGATTTTAACATTGTGGAGGAAGCTGGTGGTGTTGGTAAAGGAATTTTCAGGGATTTCAATGTTGATGTGAAAGATAACACCTTGGAGATCCATTTCTACTGGGCAGGGAAAGGAACTGCTGCTATTCCTGTTCGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTAACTCCAAACTTTGAAATTCCTTCAGAAGGGCTTTCTGCTGGAGCCATTGCTGGAATTGTGGCCGGATCATGTATGTTCCCCATACTGATATTGTTTGTCCTATGGAAGATGGGTTTCTTATGTGGGAAAGATCCACAAGACAAAGAATTATTAGATCTTAAAACAGGTTATTTCTCTTTAAGACAAATCAAAGCTGCTACTGATAACTTTGCCCCAGAAAATAAGATTGGGGAAGGAGGTTTTGGACCAGTGTACAAGGGTGCACTATCGGATGGTACAGTTATAGCTGTGAAGCAACTCTCCTCGAAATCAAAGCAAGGAAATCGCGAATTTGTGAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTAGTGAAGCTTTATGGCTGCTGCATTGAAGGAAATCAGTTGTTGTTGATATACGAGTACTTGGAGAATAACAGTCTTGCTCGCGCTCTTTTTGGTCGCCAAGAACAGAAATTACACTTGGATTGGCCAACAAGAATGAAAATCTGTGTAGGTATAGCAAGAGGATTAGCTTATCTTCACGAGGAATCGAGGTTGAAAATTGTACATAGAGATATCAAGGCGACAAATGTCTTACTTGATAAGGATTTGAATGCTAAGATCTCTGACTTTGGTTTGGCCAAGCTTGATGAAGAAGAGAATACTCATATCAGTACAAGAATTGCGGGAACGATTGGCTATATGGCTCCCGAATATGCAATGCGAGGCTACCTGACAGACAAAGCAGATGTTTATAGTTTTGGAGTTGTCGCTTTGGAGATTGTAAGTGGAAAAAGCAACACAAATTATAGGCCAAAGGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTGAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCCAGTCTTGGTTCTAGCTATTCCTCAGAGGAAGCCATGAGGATGCTGAAGTTGGCACTCTTATGTACTAATCCATCTCCAACTCTCAGACCATCCATGTCCTCTGTTGTTAGCATGCTTGAAGGAAAATCGCCGATCCAAGCTCCGATAATCAAGCGCCGGGAGAGCGGCCAAGATGCAAGATTCAAAGCCTTTGAGATGCTATCACAAGACAGCCAAAGCCAAACCTTTGTTTCTTCTTCTACATTCTCACAAGAAAGCATGGAGCAAAGACTTCAATCAATGGGCCCATGGGTTGATTCCTCTGTTTATCTTCCAACTAAAGATTGCTCTACGTAA 3027 0.3994 MELLAIPSSKLLGVFALGFFALNVFTEYGSNAQKIPDHEVRALQAISSKMKDLNWKVSPNSCMDGGFRNKSIVGDDIIRNVTCNCTFSSGKVCHVSHIQLKGLNLSGVIPSEFGNLTQLQELDLTRNYLNGSIPKSFANLPLVAISLLANRLSGSIPKEIGEISTLEDLVLENNQLEGTLPSNLGKLKRLRRLLLSANNFSGTIPESFGNLKKLEDFRLDGNNMSGKLPSFIGNWTSLNRLDLQGTSMEGPIPQTISSLKNLTQLRISDLNGKTTMRFPDLKNLKSLKQLVLRNCSITGSIPDYIGQMEGLVTLDLSFNKLTDGIPDEIQDLKKLDYMFLTQNSFSGAIPGWILANKHNLDLSYNNFSKTSATICQFKDVNLVSSLSSSAKTSTTCLKKNLPCAGKPKYHSLFINCGGSEMHDDKGNEYESDLSQEGISFFSSIADKWAYSSTGSFVGNAKADYVARNTFSLNITGPSFYQTARLSPLSLKYHGLCLLNGNYNVRLHFAEIMFSNDQTFSRLGRRIFDVSIQGRKYLSDFNIVEEAGGVGKGIFRDFNVDVKDNTLEIHFYWAGKGTAAIPVRGVYGPLISAISVTPNFEIPSEGLSAGAIAGIVAGSCMFPILILFVLWKMGFLCGKDPQDKELLDLKTGYFSLRQIKAATDNFAPENKIGEGGFGPVYKGALSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFGRQEQKLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPSLGSSYSSEEAMRMLKLALLCTNPSPTLRPSMSSVVSMLEGKSPIQAPIIKRRESGQDARFKAFEMLSQDSQSQTFVSSSTFSQESMEQRLQSMGPWVDSSVYLPTKDCST 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0553 1008 Pfam Leucine rich repeat 286 344 IPR001611 GO:0005515
Lele30g0553 1008 SMART serkin_6 665 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0553 1008 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0553 1008 Gene3D Ribonuclease Inhibitor 275 387 IPR032675 -
Lele30g0553 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 203 - -
Lele30g0553 1008 SUPERFAMILY L domain-like 88 368 - -
Lele30g0553 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 971 - -
Lele30g0553 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 740 - -
Lele30g0553 1008 Gene3D Phosphorylase Kinase; domain 1 637 740 - -
Lele30g0553 1008 Pfam Protein tyrosine and serine/threonine kinase 668 934 IPR001245 GO:0004672|GO:0006468
Lele30g0553 1008 CDD STKc_IRAK 671 938 - -
Lele30g0553 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 598 - -
Lele30g0553 1008 Gene3D Ribonuclease Inhibitor 39 166 IPR032675 -
Lele30g0553 1008 Pfam Malectin domain 412 593 IPR021720 -
Lele30g0553 1008 Gene3D Ribonuclease Inhibitor 169 274 IPR032675 -
Lele30g0553 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Lele30g0553 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Lele30g0553 1008 Gene3D - 410 598 - -
Lele30g0553 1008 Gene3D Transferase(Phosphotransferase) domain 1 741 952 - -
Lele30g0553 1008 SUPERFAMILY Protein kinase-like (PK-like) 649 937 IPR011009 -
Lele30g0553 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 279 370 - -
Lele30g0553 1008 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Lele30g0553 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0553 Lele-ChrLele30 10362774 10372124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0553 13 1007 Receptor kinase-like Gene Family AT1G53440 60.672 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0553 PK_Tyr_Ser-Thr 7.7e-50 CL0016