Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0544 ATGGAGATGAGTGCTGGCGGTCTTGTGAGTGCCCTTTTAGGTGTCAAGGAGATTGAGGCAATTTGGATAGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAGACACTTACGAAAGCTTTGGCTGGAAAGAGGTGCATTCCAGTAATTCTTGATGAAGAGATTGTTCATCAATATTATAACGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGCCTTGCCACTACAAGGAATTTCCAATCTCAGTTTGAAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGATAGAACACTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCTTAAAGGATTATGACAGCAACATGAAAGTTGGCTGGTTTCTCCACACACCATTTCCATCGTCAGAAATTCATAGGATGCTTCCATCTAGATCAGAGCTCCTGCATTCTGCTATTGCAGCAGATTTAGTTGCTTTTCACACCTATGATTATGCGCGGCACTTTACTAGTGCTTGCACTCGTATTCTTGGGCTTGAGGGTACACCTAAAGGGATTGAAGATCAAGGGACGTTGACTCGAGTTACTGCATTTCCGATCGGGATAGACTCAGATCGATTCATATCTGCACTCGAGCTTCCTCAAGTTAAGGATAACATCAAAGAATTAGAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGTCTGGATATGATTAAGGGAATTCCTCAGAAAATTCTAGCATTTGAAAAATTTCTAGAAGAGAATGCCTATTGGCGTGATAAAGTAGTTTTGATTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGATCACTGGCTGCTGTTCCTGTACTTCACCTGGATCGCTCTCTTGAGTTTCATAAACTATGTGCTTTGTATGCTATAACTGATGTAGCCCTTGTCACGTCTTTGAGGGATGGGATGAATCTTGTCAGCTACGAATATGTGGCCTGCCAGAAGCAAAAGAAGGGGGTACTCATTCTTAGTGAATTTGCTGGGGCCGCGCAGTCTCTAGGTGCTGGTGCAATTCTGGTTAACCCTTGGAACATCACCGAAGTTGCTGCTGCTATTGACCGGGCTCTGAACATGCCATCTGATGAAAGAGAGAAGTGGCATGCGCACAACTTTTTTCATGTAAAAACCCACACTGCTCAGAAATGGGCAGAAACTCTTGTAAGTGAACTAAACCAAACTGTTGCTGAGGAACGAGGAAGGACAAGACAAGTTCCAGCCACACTTCCAACCAAGGATGTGGTGGAACGTTATCTGCAGTCAACTAACCGATTGATCATTTTGGGATTCAATGGATGTTTAACTGAATCGGTCGAGAAAAAAGGCGGTCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTAAAACAGCTATTGACAGAACTATGCAGTGACCCGAAGACCACAATTGTTATTCTGAGTGGAAGTGATAGAATAGTCTTAGAGGAGAATTTTAGGGAGTACGACCTGTGGTTGGCAGCAGAGAATGGGATGTTTATACACCCTGCAAAAGGAAAATGGATGTCAACAATGCCAGAGCTTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTATTGAGTACTTCACCGAAAGAACACCCCGGTCGCATTTTGAAGAACGGGAAACGTCAATTGTGTGGAATTACAAGTATGCAGATGTTGAATTTGGAAGACTTCAAGCAAGGGACATGTTGCAGCATCTCTGGACAGGTCCCATCTCTGATGCACCAGTTGATGTGATTCAGGGTAACCGATCCGTTGAAGTGCGCGCTGTCGGCATAACAAAGGGAGCAGCTATGGACCGCATCCTTGGTCACATAGCACACTGTAAATCCATGACATCACCATTTGATTATGTCCTATGTGTAGGACATTTTCTGGCAAAGGATGAAGATGTTTTCAACTTTTTTGAGCCAGGGTTTCCTTCTATTGATTTGGCTCTTCCGGGAGCACAGGAAACAAATAGAGTTGAGTTTTGTACTGAGAAGAGATTGCCTTTGAAGACTCCAACCAGTAAAAGTGGACCAAATGCAGCATCCCAAAGGCCAAAGTCAAATTCTGAGATCTCTAGTGCCCCTTGGATTCCAACCCTTGGAACTGAAACAATTTCATGGGATATCCTAAACCTTAAGAAGGAGAATTACTTCTCCTGTGCTGTCGGACGGACTCGATCGAGTGCTCGGTACACACTCGGATCATCTTCTGATGACGTTGTTGCTTTTCTGAAGAAACTGGCTGCTGCATCTTTGAACTCTTCATCATCAAGTTAA 2433 0.4295 MEMSAGGLVSALLGVKEIEAIWIGWAGVNVPDEIGQKTLTKALAGKRCIPVILDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRNFQSQFEAYKKANQMFADVVIEHYQEGDVVWCHDYHLMFLPKFLKDYDSNMKVGWFLHTPFPSSEIHRMLPSRSELLHSAIAADLVAFHTYDYARHFTSACTRILGLEGTPKGIEDQGTLTRVTAFPIGIDSDRFISALELPQVKDNIKELEERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLIQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGSLAAVPVLHLDRSLEFHKLCALYAITDVALVTSLRDGMNLVSYEYVACQKQKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDRALNMPSDEREKWHAHNFFHVKTHTAQKWAETLVSELNQTVAEERGRTRQVPATLPTKDVVERYLQSTNRLIILGFNGCLTESVEKKGGQIKEMELKVHPELKQLLTELCSDPKTTIVILSGSDRIVLEENFREYDLWLAAENGMFIHPAKGKWMSTMPELLNMEWVDSVKHVIEYFTERTPRSHFEERETSIVWNYKYADVEFGRLQARDMLQHLWTGPISDAPVDVIQGNRSVEVRAVGITKGAAMDRILGHIAHCKSMTSPFDYVLCVGHFLAKDEDVFNFFEPGFPSIDLALPGAQETNRVEFCTEKRLPLKTPTSKSGPNAASQRPKSNSEISSAPWIPTLGTETISWDILNLKKENYFSCAVGRTRSSARYTLGSSSDDVVAFLKKLAAASLNSSSSS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0544 810 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 566 646 - -
Lele30g0544 810 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 226 429 - -
Lele30g0544 810 Pfam Glycosyltransferase family 20 1 444 IPR001830 GO:0003824|GO:0005992
Lele30g0544 810 TIGRFAM T6PP: trehalose-phosphatase 476 691 IPR003337 GO:0003824|GO:0005992
Lele30g0544 810 Gene3D - 499 690 IPR023214 -
Lele30g0544 810 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 1 225 - -
Lele30g0544 810 SUPERFAMILY HAD-like 476 800 IPR036412 -
Lele30g0544 810 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 446 - -
Lele30g0544 810 MobiDBLite consensus disorder prediction 721 745 - -
Lele30g0544 810 CDD GT20_TPS 1 444 IPR001830 GO:0003824|GO:0005992
Lele30g0544 810 Gene3D - 566 646 - -
Lele30g0544 810 CDD HAD_TPP 477 694 - -
Lele30g0544 810 Gene3D Glycogen Phosphorylase B; 226 429 - -
Lele30g0544 810 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 801 IPR001830 GO:0003824|GO:0005992
Lele30g0544 810 Pfam Trehalose-phosphatase 499 693 IPR003337 GO:0003824|GO:0005992
Lele30g0544 810 Gene3D Glycogen Phosphorylase B; 1 225 - -
Lele30g0544 810 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 2 445 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0544 Lele-ChrLele30 10286184 10294264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0544 1 800 Trehalose Biosynthesis Gene Families AT1G78580 72.554 0.0 1244