Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0539 ATGTCTCAGTCTGTCCGCAAAGCTATTGGCGCAATTTCTTCAAGATTTAAACATCCGATTAGCGTTCAAACCCAGTGGTTTTCATGGAGGTACGTTTATTCAACCTCGTCCAATGGGCATTCTTTCACCGTCTCATATCTCATTGACACCTGTGGGTTCTCACCCAAACAAGCTGCTTCAGCTTCTAAGCGTGTCAACTTTGAAACGCGAGATAAGCCAGATTCGGTTATCAAGTTCCTCAAAACTCTTGGATTCTCACAGCCCCAGATTATTCGTTTCATTACAGTGGTCCCCGAGTTTCTTCGATCTGATCCTGAGAAAACCTTTCTGCCCAAGATTGAGTTTTTCAAATCCAGAGGCGTTTCGAGTTCAAGCATCCCAAGGCTCATATGTTCTTATCCTAGCATCATGAGAAGAAGCCTAAGTAAACAGCTCATTCCTTCCTTTGATTTCTTACGAGATATTGTTCAATCTGATGAGAAGCTCATTAAAGCTCTTCAATATTGCTCTGGCATTCTTCTTGATGCCAACACCTTTGCTGTGCCTAATATGGAGCTATTACGAGAAGCAGGAGTTCCTGAATCAAATGTCATCCAATTGTTGCATTTGTATCCTAGGACATTGACTAAAAGTCCTAATCTATTTAAGGACATAGTGGAAGAAGTGAAGGAAATTGGGATTAATCCTTTGAAGGTTCAGTTTATTATGGCTGTTCATGTTTGCTCAACCTTAAAAAAATCCACACGGGCTCTAAAGGCTGATCTTTATAAGAAGTGGGGCTGGCCTGACGATGACATTCTCGCGGCATTTAGAAGGTACCCCTATTTTTTGACAGTGTCAGAGGATAAGATTGATGCAGTAATGGGAATTCTTGTCAATAAATTGGGATGTGATTCTTCCACTTTGAGAAAGTACCCTACAGTTATTACATCGAGTTTGAAAAAGCGAATTGTTCCACGGTGTGCTGTCATTCAAGTTCTGTTGTCAAAGGGTCTGGTGAAAAAGAAGACATTGCTTGGAATATTTAAATTATCTGAAAAGGACTTCTTAAGGAGGCATATCTTTCGCCATGAGCAGGAAGCTAGTGAATTATTGAAGTTGTATCAGTCTAAACTGGATCTTGCAAGGGAAATTGGGATTAATCCTTTGAAGTATCAATTTCTTATGGTTGTTCATAGCGATCGGTTTTCGGAGGCACATTATCAATGCAACCTCTCCTTCAAGATTGCAACATCTGCTTGTTCTCATATCCAATGGATTTCTGTGAGGTACGCAAATTCAACCGCCTCAAATGGCCATTCTTTCACAGTTTCATATCTCATTGACGCATGTGGCTTCTCAACTAAACAAGTTGCTTCCGCTTCTGAGCGTGTCAGCTTGGAAACGCGAGAAAAACCAGATTTAGTTATCGATTTCCTGAAAAGAAAAGGACTTTCTGAATCCCAGATTATTCGTTTCGTTAGTTATGACCCATTGATTCTTCGATGTGATCCTGACAAAGCCCTTCTGCCCAAGATTGAGTTCTTCAAGTCCATAGGCGTTTCGAGCTCAAGCATCCCTAAGCTCATGTGCAGTTATCCTAGCATTATGAGGAGAAACTTAAGCAATCAGCTCATTCCTTCCTTTGATTTCTTTCGGGATTTGACACTGACTAGAAATTCTGATCTGTTTAAGGATGTTGTGGAAGAAGTGAAGGAAATTGGGTTTGATCCTTTGAAATTTCAATTTGTTATGGCTGTTAGGGTCAGGTTTGTAAAGTTCACGGCAGGTTGTATAGAATACATAAGATTGACCTCCATTATTGTTTTTGCTGAGCTTGGGGACCTGAATTTTGATTCTCTTAGTTGA 1848 0.4042 MSQSVRKAIGAISSRFKHPISVQTQWFSWRYVYSTSSNGHSFTVSYLIDTCGFSPKQAASASKRVNFETRDKPDSVIKFLKTLGFSQPQIIRFITVVPEFLRSDPEKTFLPKIEFFKSRGVSSSSIPRLICSYPSIMRRSLSKQLIPSFDFLRDIVQSDEKLIKALQYCSGILLDANTFAVPNMELLREAGVPESNVIQLLHLYPRTLTKSPNLFKDIVEEVKEIGINPLKVQFIMAVHVCSTLKKSTRALKADLYKKWGWPDDDILAAFRRYPYFLTVSEDKIDAVMGILVNKLGCDSSTLRKYPTVITSSLKKRIVPRCAVIQVLLSKGLVKKKTLLGIFKLSEKDFLRRHIFRHEQEASELLKLYQSKLDLAREIGINPLKYQFLMVVHSDRFSEAHYQCNLSFKIATSACSHIQWISVRYANSTASNGHSFTVSYLIDACGFSTKQVASASERVSLETREKPDLVIDFLKRKGLSESQIIRFVSYDPLILRCDPDKALLPKIEFFKSIGVSSSSIPKLMCSYPSIMRRNLSNQLIPSFDFFRDLTLTRNSDLFKDVVEEVKEIGFDPLKFQFVMAVRVRFVKFTAGCIEYIRLTSIIVFAELGDLNFDSLS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0539 615 Gene3D Transcription termination factor 3, mitochondrial 433 590 IPR038538 -
Lele30g0539 615 Gene3D Transcription termination factor 3, mitochondrial 158 367 IPR038538 -
Lele30g0539 615 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 198 228 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 520 551 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 SMART mt_12 484 515 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 PANTHER CGI-12 PROTEIN-RELATED 431 548 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 FunFam Mitochondrial transcription termination factor-like 141 361 - -
Lele30g0539 615 Pfam mTERF 291 350 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 Pfam mTERF 77 299 IPR003690 GO:0003690|GO:0006355
Lele30g0539 615 Pfam mTERF 470 548 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0539 Lele-ChrLele30 10251899 10257279 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele30g0539 mTERF 1.9e-26 No_clan