Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0538 ATGTTTTGCTTTCTCAGAAGAATCATCCCTTCCCGGAGGCACATCCCTCCTTCAACATTTCAACAAATACTTTGCGTTCAAAACCAATGGCTCCCTGCCACTGCCAGGTACTGTAATTCAATTTCATTCGATGGGGATTCTTTCACAGTCTCATATCTCATTGACACTTGTGGCTTCTCTCCCGAAGACGCTGCTTCAGTTTCCAAGTATCTTAGCTTGAAAACGCGTGAAAAACCAGATTTGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAAATCCCAGATTCTTCATTTCACAAGAGGAGTCCCACAGTGCCTTCGATCTGACCATGAGAAAACCTTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAAGCTCTTATGTAGCTGTCCTACCATTATGATAAGAAGCTTGGATAAGCACCTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATGAGAAGCTCATTAAAACTCTTAAATATTGCTCGGGCATTCTTATTGATCTTAACACCCATGCCGTGCCTAATATGAAGCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATATAATGAAATTGTTGCAACTGTATCCCAGGACGTTGACTAAAACTACTGTCAAATTCAATATGATAGTGGAGCAAGTTCAGGAAATGGGGTTTGATCCATTGAAGTGTCTATTTATTGTGGCCGTTTATGCATTGTCGTCACTAAGCAAATCTACATGGTCAAAAAAGGCCAATGTGTATAAGAAGTGGGGCTGGTCTGACGAGGACGTTATTACTGCGTTTAGAAGGTTTCCATGTTGTATGAAGGCATCTGAGGATAAGATTGATGCAATAATGGAGATTCTTGTTGATAAATTGGGCTGTCCACCTTCCACTATTCCCAGATATGCAGTAGTTCTGACATTAAGTGCAAATAAGCGAATTATTCCTCGGGCATCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCTTGTGAAAAAGAAGATATCGCTTGGAATATTTAAATTATCCGAAAAGGACTTTTTAAGGAGGCATATCTTTTGCCATGAACTGGAAGCTAATGAATTATTGAAGTTGTATCAGTCTAAATTGGATCTTGTGAGAAAAGTGGAGACTGGATAG 1164 0.3978 MFCFLRRIIPSRRHIPPSTFQQILCVQNQWLPATARYCNSISFDGDSFTVSYLIDTCGFSPEDAASVSKYLSLKTREKPDLVINFLKNLGFSKSQILHFTRGVPQCLRSDHEKTLLPKIEFFISRGVSSSDIPKLLCSCPTIMIRSLDKHLIPSFDFFRDLFQSDEKLIKTLKYCSGILIDLNTHAVPNMKLLREVGVPESNIMKLLQLYPRTLTKTTVKFNMIVEQVQEMGFDPLKCLFIVAVYALSSLSKSTWSKKANVYKKWGWSDEDVITAFRRFPCCMKASEDKIDAIMEILVDKLGCPPSTIPRYAVVLTLSANKRIIPRASVFQVLLSKGLVKKKISLGIFKLSEKDFLRRHIFCHELEANELLKLYQSKLDLVRKVETG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0538 387 Gene3D Transcription termination factor 3, mitochondrial 60 181 IPR038538 -
Lele30g0538 387 Gene3D Transcription termination factor 3, mitochondrial 182 373 IPR038538 -
Lele30g0538 387 PANTHER CGI-12 PROTEIN-RELATED 46 364 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 FunFam Mitochondrial transcription termination factor-like 147 367 - -
Lele30g0538 387 Pfam mTERF 83 234 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 Pfam mTERF 249 355 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 61 92 IPR003690 GO:0003690|GO:0006355
Lele30g0538 387 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0538 Lele-ChrLele30 10247512 10248675 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele30g0538 mTERF 3.5e-20 No_clan