Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0537 ATGTTTTGCTTTCTCAGAAGAAGCATCCCTTCCCGGAGGCATATCCCTCCTTCTATATTTCAACAATTACCTGGCGTTCAAAACCAATGGCTCCCTGCCATTGCCAGCTTCCAAGTATGTGGCTTCGAATCGCGAGAAAAACCAGATTTGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAAATCCCAGACTCTTCGTTTCACACGAGAAGCCCCGCAGTGTCTTCGATATGACCCGGAGAAAACCTTACTTCCCAAGGTCGAGCTTTTCATATCCAGAGGCTTTTTGAGATCAGACATCCCTAAGCTCTTATGTAGTTGTCCTAACATTATGAGAAGAAGCTTGAATAAGCAGCTCATTCCTTCGTTTGATTTCTTTCGGGATTTGTTTCAATCTGATGACAAGTTCATTAAATCTCTTACATCTTTCCCGGGCATTCTTCTTGATACTAACAACCGTGTCGTGCCTAATATGAATCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATGTCATTAAGTTGTTGCAACGGTATCCCAGGACATTGACTACGAGTACTGGTCGATTCAAGATGATTGTGAAGGAGCTTCAGGAAATGAAGTTTGATCCTTTAAGGTATCTATTTGTTATGGCCGTTTATGCATTGTCATCACTAAACAAATCTACATGGTCAAAAAAGGCTAATGCGTATAAGAATTGGGGCTGGTCTGATGAGGACATTATTGTTGCTTTTAGAACGTCTCCATTTTGTATGAAGATACCTGAGGATAAAATTGATGCAACAATGCAGATTCTCGTTGATAAATTGGGCTGTCCCCATTCCACTATTCCCAGATATGCAGTAGTTCTGACATTAAGTGCAAATAAGCGAATTATTCCTCGGGCATCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGCTTGCTCTCAATATTTGTCTGCACTGAAAGGGAGTTTTTGAAAAGATTTATCCTGAGTCATGGGGAAGAAGGTAGTGAACTCCTGAAGCTGTATCAGGCTAAACTAGATCTTGCAAGACCGCAAGCAAGCAAATCCACATGGGGAAAAATGTTAATGTTTATGAGAAATGGGGTTGGTGTGAGGATGAAATTCTTGCAGCATTTAGAAAGTATCCAATGCGGTGCTGGGTTTGCTTGTCAACAAATTTGGTTTTGTGTCAAAGGGTCTGGTGCAAAAGGAATGTTTGCCACTGCTACGGACCTATTGAAGCTGTATCAGGGTAAATTGGAGCTTGCAAGGTGA 1278 0.4108 MFCFLRRSIPSRRHIPPSIFQQLPGVQNQWLPAIASFQVCGFESREKPDLVINFLKNLGFSKSQTLRFTREAPQCLRYDPEKTLLPKVELFISRGFLRSDIPKLLCSCPNIMRRSLNKQLIPSFDFFRDLFQSDDKFIKSLTSFPGILLDTNNRVVPNMNLLREVGVPESNVIKLLQRYPRTLTTSTGRFKMIVKELQEMKFDPLRYLFVMAVYALSSLNKSTWSKKANAYKNWGWSDEDIIVAFRTSPFCMKIPEDKIDATMQILVDKLGCPHSTIPRYAVVLTLSANKRIIPRASVFQVLLSKGLVKKESLLSIFVCTEREFLKRFILSHGEEGSELLKLYQAKLDLARPQASKSTWGKMLMFMRNGVGVRMKFLQHLESIQCGAGFACQQIWFCVKGSGAKGMFATATDLLKLYQGKLELAR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0537 425 FunFam Mitochondrial transcription termination factor-like 116 335 - -
Lele30g0537 425 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 SMART mt_12 138 168 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 SMART mt_12 66 97 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 SMART mt_12 274 308 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 Pfam mTERF 172 325 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 Pfam mTERF 52 278 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 PANTHER CGI-12 PROTEIN-RELATED 36 332 IPR003690 GO:0003690|GO:0006355
Lele30g0537 425 Gene3D Transcription termination factor 3, mitochondrial 133 341 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0537 Lele-ChrLele30 10243778 10245714 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele30g0537 mTERF 7.8e-27 No_clan