Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0531 ATGCAGCAATATCAGCTCAAGAAGGATGTTAAAGAATTGGGTTTCTTCACTGAGTATGGAGATGCCAATAGATACAAGCTTCTTGATGTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCGGCAATTGACACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCACGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTCAAACTACTCAGGCTTTTAAGGCACCCTGATATCGTAGAAATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTTTGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCACGTCATTAAAGCTAATGATGATTTGACCCGTGAACATCATCAGTTTTTTCTCTATCAGCTCCTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCACAGAGACCTCAAACCCAATAACATATTGGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATGCTCCGACAACAATATTTTGGACAGATTATGTTGCTACTAGATGGTACAGAGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGGTTCGAAATGAGAAGGCAAGAAAATACTTGATGGAAATGAGGAAAAAACGACCTGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATCCATTGGCACTTCGCCTTTTGCAAAGGCTTCTAGCATTTGATCCCAAAGATCGGCCAACTGCTGAAGAGGCGCTGGCTGATCCTTATTTCAAGGGCTTGTCCAGAGTTGAGAGAGAACCTTCTCGTCACTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATTAGAGAACTAATATATCGTGAAATACTGGAATATCACCCTCAGATGCTTAAAGATTACATGAATGGAACTGAAGGCAACTTTCTCTATCCAAGTGCAATAGGCCAATTCAGAAAGCAATTTACTTATCTCGAGGAAAATGGTGGCTCTGTCACTCCCCCAGAAAGGAAGCATGTCTCCCTTCCAAGGGCCACTGTTCACTCGGGTACAATCCCTCTTAATACAAAGCCAAATTTCAATTTGTATGAGAACAAGAAAAATGCAGAAGAGGCGTCTAAGAGTTTAAGAGCAGCAGAATCAAATTCTGGAAATCGATTGAGGGGTTCCCGGCCTCCACCAAGGGCGCCAACAGCTAAGCCAGGGAGAGAGGTAGGCCCAGTTGTACCCTATGAAAACGGGAGAAGCACAAGTACTTTTTATGACCCAAGGATCTTTTATCAAAATGCTCTTCCCCAAGCGGCTGGTTCTCCTCACTGCTTTTTCATACCTCAACCCACAAACTCACACAAGACTGTATCAGAGACATGCCTGGTTTTTTCACAATGCAAGCATCAAGTCCCATTCCAGCAGTGTCACCACCTAACCAGACCTGTAATGGACCTCAACACCAACCCATACCAACAAGTAGCCAAGACCGATCGGTATGATAATAATCACATGATTACAATCGATACGAAGCTGCTGCAGGCACAATCCCACTTTGGTGCAGTTGGTGCTGCAGCCCATAGACATTCTGGTGCTGTTCTGTATGGATTGTCATAG 1653 0.4247 MQQYQLKKDVKELGFFTEYGDANRYKLLDVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDIFVVFELMESDLHHVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPNNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKVRNEKARKYLMEMRKKRPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSRVEREPSRHSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYMNGTEGNFLYPSAIGQFRKQFTYLEENGGSVTPPERKHVSLPRATVHSGTIPLNTKPNFNLYENKKNAEEASKSLRAAESNSGNRLRGSRPPPRAPTAKPGREVGPVVPYENGRSTSTFYDPRIFYQNALPQAAGSPHCFFIPQPTNSHKTVSETCLVFSQCKHQVPFQQCHHLTRPVMDLNTNPYQQVAKTDRYDNNHMITIDTKLLQAQSHFGAVGAAAHRHSGAVLYGLS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0531 550 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lele30g0531 550 SUPERFAMILY Protein kinase-like (PK-like) 21 270 IPR011009 -
Lele30g0531 550 FunFam Mitogen-activated protein kinase 109 207 - -
Lele30g0531 550 FunFam Mitogen-activated protein kinase 15 118 - -
Lele30g0531 550 Pfam Protein kinase domain 25 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0531 550 Gene3D Transferase(Phosphotransferase) domain 1 206 289 - -
Lele30g0531 550 ProSiteProfiles Protein kinase domain profile. 25 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0531 550 MobiDBLite consensus disorder prediction 345 427 - -
Lele30g0531 550 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 206 290 - -
Lele30g0531 550 Gene3D Phosphorylase Kinase; domain 1 23 108 - -
Lele30g0531 550 Gene3D Transferase(Phosphotransferase) domain 1 109 204 - -
Lele30g0531 550 SMART serkin_6 25 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0531 550 MobiDBLite consensus disorder prediction 364 379 - -
Lele30g0531 550 Gene3D Phosphorylase Kinase; domain 1 290 312 - -
Lele30g0531 550 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0531 Lele-ChrLele30 10203464 10208045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0531 1 548 MAP Kinase Gene Family AT1G53510 60.450 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele30g0531 Pkinase 2e-45 CL0016