Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0504 ATGGCAAGCAGCTCCCAAGTTATAACATGCAAAGGAGCAATATGTTGGGGAATAGGAGAGGAAGTGAAGGTGGAAGAGATACAAGTAGATCCTCCAAAAGCTTCAGAAGTTCGTGTTAAGATGCTTTTTGCCAGCATCTGCCACACAGACTTCTTGAGAGCTCGAGGTCATCCATATCCCTGTTTTCCTCTAGCTCTAGGGCATGAAGGTGTAGGTGTTGTGGAGAGCGTAGGGGAGAAAGTGACAAATTTCAAGGAAGGAGATGTAGTGATTCCAATATACATAGGAGAATGTGGAGAATGTGAGAATTGTGTTTCAGAGGAATCAAACATATGCACGAGATATCCTTTAAGAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCAGTAAGAGGGCAGAAGGCGTATCATGTGTTTAGCTGCTCAACATGGTGTGAGTATATGGTTAGTGATGAAAACTACCTTATGAAAGTTGACAAGAGTATTGATTTGGCTCATGCAAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGTGCTTCTTGGAAGGCTGCCCAAGTTCAAAGTGGATCAACAGTAGCTGTTTTTGGCCTCGGGGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAGATGATGGGAGCAACAAAGATAATTGGGATTGACATAAATGAGAAGAAGAGAGAAAAGGGAGAAGCTTTTGGAATGACAGACTTCATAAATCCTAAGGATCATTCTGATAAGCCTTCTTCTCAATTGGTGAAAGATCTCACCAATGGATTGGGTGTGGATTATGCCATTGAGTGCACTGGTGTTGCCTCTTTGCTCACTCAAGCCCTAGAATCTACTAAACTGGGGAGAGGGAAGGCAATAGCGATTGGTGCAGGAACAGAGGAATTTGTGAAAATCAACTGGTTGGGTCTTCTTCTTGGAAGAACTGTGAAGGGGGCAATTTTTGGAGGCTTGAAACCCAAATCTGACCTTTCTATTTTAGCCACCAAATGCCAAAACAAGGATTTACCTCTTGATGAGCTTTTGACTGATGAAGTCCCGTTGACAGAGATAAACAGAGCTTTTGAGCTCTTGAAACTGCAAGATTGTGTTAAAGTTATTATCAAGATGTGA 1128 0.4273 MASSSQVITCKGAICWGIGEEVKVEEIQVDPPKASEVRVKMLFASICHTDFLRARGHPYPCFPLALGHEGVGVVESVGEKVTNFKEGDVVIPIYIGECGECENCVSEESNICTRYPLRVSGLMPDDTSRISVRGQKAYHVFSCSTWCEYMVSDENYLMKVDKSIDLAHASFISCGFSTGFGASWKAAQVQSGSTVAVFGLGAVGLGAISGAKMMGATKIIGIDINEKKREKGEAFGMTDFINPKDHSDKPSSQLVKDLTNGLGVDYAIECTGVASLLTQALESTKLGRGKAIAIGAGTEEFVKINWLGLLLGRTVKGAIFGGLKPKSDLSILATKCQNKDLPLDELLTDEVPLTEINRAFELLKLQDCVKVIIKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0504 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Lele30g0504 375 Gene3D - 179 318 - -
Lele30g0504 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 334 IPR036291 -
Lele30g0504 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Lele30g0504 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Lele30g0504 375 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
Lele30g0504 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Lele30g0504 375 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
Lele30g0504 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Lele30g0504 375 SUPERFAMILY GroES-like 4 189 IPR011032 -
Lele30g0504 375 CDD liver_alcohol_DH_like 8 374 - -
Lele30g0504 375 Gene3D - 13 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0504 Lele-ChrLele30 9962953 9965671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0504 35 367 Monolignol Biosynthesis Gene Families AT2G21730 26.706 1.15e-17 81.6