Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0496 ATGGAAAGCGGTGAAGATACCAAACCAAAGGATTTTTACAAAGTGTTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTCAATTACCGAAGGCTTGCACTGAAATGGCATCCTGACAAGCACGGAGGTGACAGTGCTGTTACCGCAAAATTCCAAGAAATCAATGAAGCTTACAGTGTGTTGAGTGATCCTGCCAAACGGATTGAATATGATTTAACTGGAATCTATGAGATTCACAAGTATAGCTTGCAGGAATATCTAGCCAGATTCAAAGGGATGATACTTACCTGCAATGGACTTGGCATCAATCATGCTCAAATATGGTCACAACAATTGAATGAAAGCGTTGAATCCCACGATAAATGA 372 0.3925 MESGEDTKPKDFYKVLEVDYDATDENIKFNYRRLALKWHPDKHGGDSAVTAKFQEINEAYSVLSDPAKRIEYDLTGIYEIHKYSLQEYLARFKGMILTCNGLGINHAQIWSQQLNESVESHDK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0496 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Lele30g0496 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Lele30g0496 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Lele30g0496 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Lele30g0496 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Lele30g0496 123 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Lele30g0496 123 SMART dnaj_3 10 68 IPR001623 -
Lele30g0496 123 SUPERFAMILY Chaperone J-domain 8 98 IPR036869 -
Lele30g0496 123 Gene3D DnaJ domain 1 90 IPR036869 -
Lele30g0496 123 Pfam DnaJ domain 11 73 IPR001623 -
Lele30g0496 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 108 - -
Lele30g0496 123 CDD DnaJ 11 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0496 Lele-ChrLele30 9907481 9911882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0496 1 73 C2H2 Transcription Factor Family AT1G74250 41.026 7.95e-11 56.2