Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0468 ATGAAACTCTCTTTCTCTGTTCAATCGAAATCCAACTCCAAGTCAAACCCCATCAGGCTCTCCAACAAATTCGACGCGGCCGCTGCCGATACCAAAGATGGAAAGTCCAATGCCAGAGAGTATTTTACAGAGTTCGATGCTTCGAAATCCCCTTCTGATCCTAACAAATCCACCATGGTTATTCCCCCTATTGAGAACGAGTGGAATTTAGGGAGGTCCCACAAGAGAATGAAGAATCTAGACTTACCCATCATTGAATCTAATGGAAGCGAGTTAGGATTTGAGCTGGATATGTCGACAGTTGTGGAACCCGGTTCGGACATGTCTTATGGTCTGAATCTTCGGCAGACAAAGAAGAACGATGGGGACGAGGAGAAACCTGCTGCTGTCGGTGATGGTGGTGGTGATGATAATAACGGAAGGTCGCGGCCTGTTTCTCTGGACTCTGTGGTGCTGCAGAAATTTAAGGATGATATGAAGAGGTTACCGGACGACAGAGGTTTTGATGAGTTCCAAGATGTCTCTGTTGAGGGTTTTGGTGCAGCTTTGCTTGCTGGGTATGGATGGCGTGAAGGAATGGGCATCGGAAAGAATGCGAAGGAGGATGTGAAAGTTGTACAATATGAGAGGAGGACTGCCAAAGGAGGGCTGGGTTTTGTCAGTGATCATGCTCGTAAGTGGAGTTTGAAGGAGGAAGTGGAGATACCTAAGGCGTCTGGTGGAGAGAGCTCGTTCTTGGGGAAGGTTGTTAGAATAGTTGAGGGCAGAAATGCAGGTCTGAAGGGTAAAATTGTACGAAAAGTTGAAGATAAATGGGTTATTTTAAAGCTTTCGGAGAGTGAAGAGGAAGTAAAAGTAGACCTTGGCGATTTTGTAGATCTGGGTTCTACCGAAGAAGATAGGTTCTTGAAGAAATTGAAGGAGTTAAAGATTCAACATGCTGATAAAGATAGAGATTCATGGAATAAACATGGTAGAGATGAAGGAAGGAGAGGCCGTGATGAGGTTGTAGTTGACGTTAAAAGAGATAGTAGGAAGGAAGAGCAGGGGAAGAAACAAGTTTCATGGCTTACAAGTCATATTCGGGTCAGGGTTATTAGCAAAGATTTCAAAGGAGGGCGATTATATTTGAAGAAGGGGCAGGTATTGGACGTTGTTGGGCCTAATACTTGTGATATATCTATGGATGATAGCAAGGAGATCATCCAGGGGGTTTCCCAAGACCTTCTTGAGACTGCCATCCCTCGCCAAGGAGGGCGAGTTCTTGTATTATGTGGTAAACATAAAGGTGTTTATGGGAGTCTAGTTGAGAGCGATTTGGATAAAGAAATTGCTGTTGTTAAAGATGCTGATACCCATGCACTGGTCAATGTGCGGCTTGAACAAATTGCAGAATTTATAGGGGATCCAAGTATCTTGGGATACTGA 1428 0.4447 MKLSFSVQSKSNSKSNPIRLSNKFDAAAADTKDGKSNAREYFTEFDASKSPSDPNKSTMVIPPIENEWNLGRSHKRMKNLDLPIIESNGSELGFELDMSTVVEPGSDMSYGLNLRQTKKNDGDEEKPAAVGDGGGDDNNGRSRPVSLDSVVLQKFKDDMKRLPDDRGFDEFQDVSVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKGGLGFVSDHARKWSLKEEVEIPKASGGESSFLGKVVRIVEGRNAGLKGKIVRKVEDKWVILKLSESEEEVKVDLGDFVDLGSTEEDRFLKKLKELKIQHADKDRDSWNKHGRDEGRRGRDEVVVDVKRDSRKEEQGKKQVSWLTSHIRVRVISKDFKGGRLYLKKGQVLDVVGPNTCDISMDDSKEIIQGVSQDLLETAIPRQGGRVLVLCGKHKGVYGSLVESDLDKEIAVVKDADTHALVNVRLEQIAEFIGDPSILGY 475
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0468 475 SMART kow_9 414 441 IPR005824 -
Lele30g0468 475 SMART kow_9 243 270 IPR005824 -
Lele30g0468 475 MobiDBLite consensus disorder prediction 1 35 - -
Lele30g0468 475 MobiDBLite consensus disorder prediction 117 131 - -
Lele30g0468 475 Gene3D - 360 414 - -
Lele30g0468 475 SMART G-patch_5 174 220 IPR000467 GO:0003676
Lele30g0468 475 MobiDBLite consensus disorder prediction 106 145 - -
Lele30g0468 475 ProSiteProfiles G-patch domain profile. 176 222 IPR000467 GO:0003676
Lele30g0468 475 PANTHER G PATCH AND KOW-CONTAINING 1 471 IPR045166 GO:0000398
Lele30g0468 475 MobiDBLite consensus disorder prediction 1 20 - -
Lele30g0468 475 Pfam G-patch domain 163 221 IPR026822 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g0468 Lele-ChrLele30 9682540 9683967 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0468 356 448 C2H2 Transcription Factor Family AT1G55460 35.484 1.14e-06 48.9