Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0453 ATGGATCCATTTGATGATGTTTTACCAGAAACTCCTGTTTCACGTGCTAGGGTGGGTGGCAAGTTTGTTCCAAAGGCCAAAGCTAAACAGCCGGCACGAAAGGAAATATCTACATCAAATCAAGCAACCTCATCTAACGATGGAAAGAATGGGCATGTTGCATCATCATCCATGAGCTTGGGCACAGTAGGAAATGTTCCAACAAAAAGTAGTAATCCAGTTGATTTAACTCCAGATAAATCAGATAAAGAATTTCTGAAATCCAGTCATAGTTCACCAGTAGAAATCCCAGTCTTGGATAATAGTAATTCTGACCTGGAGAGTTTTCAACAAATTAATGTGAGTGGATGCAGTGCAGTATTGGTGGAAGCTCAGCCTTCAACCATTGCAGCATCTGAGGTCAATAGTGATTGGTCTGCCAATTTTCCAAAAGCAGCTAATGAGGCAAACCCTGTTGGTTTTGATGTGGGTCTAGTAATTGACCCTGTTCCCGGGACTGACCTCCATAATGCTAACTCAACCATTATTGAGCATAAAGAACCTTCTAAATACTGGGAAGGTGACGGTCCATTTCTTGATGGCAACAAAAGTTTGGAACCTATTGATTCCTCATTGCAAGCTGGTCCTGAAGTGGAAACCCAAAGTGCTTCAGATTGTAAGGTTGCAATGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAGGAGAGGTGTTGTCTGCTGAATTTGAATTGGATCCTTTCGGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCACAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGAGTAGGGACTGCAGCAGTTGTTACTTCCGCTTCATCTAATGATATCCTTGAGACCAACAATACATTAAGTGATACTAATAATTCACTCTCGAGCTTGGGAACAGTAATCCATTCACAATCAGAGCCTCCTACTGCCATGCTTTCAGAGGTTGCTGTTCACAATGAGCCTAGAGATTGGCCTTCTAATGGTGGAAAGCCAGTGGGAGAGACTACAGACATATTTTCTGTGTTGGAGAACCTTGATGACTTTCTCACACAAGATGGCTCTAGTGCAGGAAATCCAGCTGTTCATTCTTTCCATGAGAAGGGAACAGAGGATTTTGTCAACCAGCCATGCCATATGTCCCAAGTTCAAAAGTTTCCTGAGACTCATGATTCATTGACCTTCAATGAAGCTGCAGTCCTCGGTGAGGGTGATTCTCTCACTAACAATGGAAGGTTGACAGCAGAGGAAGTAGGGGGATCAAATCCTGCCTGCCCTCTTGATGGTACCTTTGATTATTCATCCATGAATTCTGGCTCAGATCCAACTTTTGAAATTCCGGTGCATGAAGAACCAACAAATACAGCAGATAATCCTACTTATGATGACCTTCTGCATGCGGAAGATGTTCCTGGAGGAAAAGATGATGGCGGTTATAAAGAAAAAGATGCCCCATTGTCAAGTTCTCCAAGAAATCATACGAAATCTTCTGAAGTAGGTGATAAGGATAAAGTTGATAAACCTCGGAGGCAGGTGAGAAAGCGAGTTAATCTTAAACCTGTTGATCCAGCGGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCCTTCTTACTCTAACACTGATGAACCTGAAGAACAAGATGATGAATATGGATTGAATAATGGATGCTGGAAGAAAAAGAAGAAATATGTGACAAAAAATGCAAAACGATCTCAAAAGCGTAAAAGGGCCAATGAGGATTCAGATAAATCTACCAAAGAACCTCGTAAAAAATTCTCTCATTCGACCCAACGAAGAAAAAGATGTGTGGACAAGACTTTGCTGGAAATTCCTGAGGATGAACTGGATCCTCAAACATTACGTATCAAGGATATTATACTACTTGCAGAATATAGGGAGCGACTAGCAAAAAAGGAGGCAGCGGCATCAAAAACATCTTCAGTTAATGGAAGAGATGGAGACTCCCTTCATGAGGCTGCTGCTCATAATGAAGACATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCTAATGAAAGCATTCCATTAGCTCCCACTTTATTCAATTACCAGTCTTTCATGGACAAGAAACCTAGAGGAAAATGGTCGAAACAAGACACTGAACTGTTCTTTGAGGCTGTTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCAGGTCGAACACGTCATCAAATTAAGTTGAAGTACAAACAAGAAGAACGTCAACATCCTTTACTCCTATCTGATGCTGTAAATAATTGTGCGAAAGATCTTTCTCATTTTAAATCAGTTATTGAGCGGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACACTACAGATGCCTCAGTTGGCACGACAGAAGAAATGGTGGACATGACATCCAATCCTAATCCTAATGAAGGGAAAGATGCTAAAGCTGAGCAGGATGGAGCTGTGCAAGATCATCAGGAAGATAATGGGACATTGCATAGTGCTGAGAAACCTGATGAAATTGATGATGATGGTGGTGATGATGATGACGACGACTTCGAAAGATGGTGTCAATATAAAAGCGATTATTAG 2613 0.4179 MDPFDDVLPETPVSRARVGGKFVPKAKAKQPARKEISTSNQATSSNDGKNGHVASSSMSLGTVGNVPTKSSNPVDLTPDKSDKEFLKSSHSSPVEIPVLDNSNSDLESFQQINVSGCSAVLVEAQPSTIAASEVNSDWSANFPKAANEANPVGFDVGLVIDPVPGTDLHNANSTIIEHKEPSKYWEGDGPFLDGNKSLEPIDSSLQAGPEVETQSASDCKVAMMETSHSNSNLERAGEVLSAEFELDPFGDTLPDPGLRNAHKFQPKIKPRPRVGTAAVVTSASSNDILETNNTLSDTNNSLSSLGTVIHSQSEPPTAMLSEVAVHNEPRDWPSNGGKPVGETTDIFSVLENLDDFLTQDGSSAGNPAVHSFHEKGTEDFVNQPCHMSQVQKFPETHDSLTFNEAAVLGEGDSLTNNGRLTAEEVGGSNPACPLDGTFDYSSMNSGSDPTFEIPVHEEPTNTADNPTYDDLLHAEDVPGGKDDGGYKEKDAPLSSSPRNHTKSSEVGDKDKVDKPRRQVRKRVNLKPVDPAENEDPEEEDELDPSYSNTDEPEEQDDEYGLNNGCWKKKKKYVTKNAKRSQKRKRANEDSDKSTKEPRKKFSHSTQRRKRCVDKTLLEIPEDELDPQTLRIKDIILLAEYRERLAKKEAAASKTSSVNGRDGDSLHEAAAHNEDMLGSEYGRGSDDDQANESIPLAPTLFNYQSFMDKKPRGKWSKQDTELFFEAVRQFGTDFSMIQQLFPGRTRHQIKLKYKQEERQHPLLLSDAVNNCAKDLSHFKSVIERLQQASAKTEQDTTDASVGTTEEMVDMTSNPNPNEGKDAKAEQDGAVQDHQEDNGTLHSAEKPDEIDDDGGDDDDDDFERWCQYKSDY 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0453 870 MobiDBLite consensus disorder prediction 786 870 - -
Lele30g0453 870 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 706 762 IPR017930 -
Lele30g0453 870 MobiDBLite consensus disorder prediction 819 847 - -
Lele30g0453 870 MobiDBLite consensus disorder prediction 582 600 - -
Lele30g0453 870 SUPERFAMILY Homeodomain-like 712 760 IPR009057 -
Lele30g0453 870 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 870 - -
Lele30g0453 870 CDD SANT 713 754 IPR001005 -
Lele30g0453 870 ProSiteProfiles SANT domain profile. 709 760 IPR017884 -
Lele30g0453 870 MobiDBLite consensus disorder prediction 418 611 - -
Lele30g0453 870 MobiDBLite consensus disorder prediction 786 818 - -
Lele30g0453 870 Pfam Myb DNA-binding like 704 788 IPR039467 -
Lele30g0453 870 MobiDBLite consensus disorder prediction 502 531 - -
Lele30g0453 870 Gene3D - 714 790 - -
Lele30g0453 870 MobiDBLite consensus disorder prediction 469 495 - -
Lele30g0453 870 SMART sant 710 758 IPR001005 -
Lele30g0453 870 MobiDBLite consensus disorder prediction 33 75 - -
Lele30g0453 870 MobiDBLite consensus disorder prediction 532 558 - -
Lele30g0453 870 MobiDBLite consensus disorder prediction 1 95 - -
Lele30g0453 870 ProSiteProfiles Myb-like domain profile. 706 756 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0453 Lele-ChrLele30 9535004 9541200 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele30g0453 Myb_DNA-bind_7 6e-28 CL0123