Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0445 ATGGGGTGCCTCTGCTCAAAAGACAAGAATGAAGTTGATGAATGTGATAAAGAAGAAGACTTAACCAAATCTTCATCATTACAACTGGTCGCTCCTGCTCTCTCAACAGCACCATTGGGTGGTGGCGTTGACACTGATGGTTCGGTGAATAGGTTGCTTAAGAAATATTCACATACAAATGTAAACAACCACTATGTAGTTGACGCAAAACCGATAAAAGGCCAACATCAGAGATGTGCTAGTGTTGGGGAAGGAAAGGGATCAGTGTCTCGAATGCTTAGCATGTCACGGGGTACAGAAGCAGAACATGTTGCTGCAGGATGGCCGTTGTGGTTATCTTCAGTAGCAGGAGATGCCATCAAAGGGTGGGTTCCTCGACGGCTAGACTCTTTCGAGAAGTTAGGCCAAGTGGGGCAAGGTGCTTATAGCAGCGTACATAAGGCTTGCGATCTTCAAACTGGTAAAATTGTGGCATTGAAGAAAGTGCGCTTTTCATCTTCAGATGCTGAAAGTGTTCGCTTTATGGCTAGGGAAATCTACATTTTGCGTCAACTTGACCATCCAAATGTCATGAAGCTTGAGGCTATTGTGACATCAAGGACGTCCAGCAGCTTGTATCTTGTCTTTGAGTACATGGAACATGACCTTTCTGGACTACAAGCGTTGCCTAGGATGAAGTTCACCGAACCTGAGATAAAATGTTATATGCAGCAATTGCTTTGTGGGCTTGAACACTGCCATAGTCATGGTGTGCTACACCGTGACATCAAGGGTTCAAATCTTCTGCTTAACGGTGATGGAATTCTTAAGATTGCAGACTTTGGTCTTTCAACTGTTTACCAAACTGATAAAAAGGAGCCATTGACTAGCCGTGTCGTGACTCTGTGGTATAGGCCACCTGAGCTTTTACTTGGTGCTACAGATTATGGACCTGCAATTGATTTGTGGAGTGCTGGTTGCATTCTAGCAGAATTTCTATTTGGGAAGCCTATTATGCCAGGAAGAACAGAGGTAGAACAAATGCATAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAAGAGTTTTGGCAGAAAACAAAATTGCCCCATGCAACAAGTTTTAAACCTCAGGAACCATACAGACGCCGTGTTTCTGAAACATTTAGAGACTTTTCTCCTTCAGCCTTGGCTCTTGTTGAAAAGCTCCTTGCAATAGAACCAGAAGATCGAGGTTCAGCAACTTCTGCTCTTCAGAGTGAGTTCTTCACAACACTGCCCCTACCTTGTGATCCATCAAGTTTACCGAAGTTTCCTCCTAGCAAGGAGTTTGATGCCAAGCTTAGAGATGAGGAAGCAAGAAGGAAAAACAATGAAGCTGTAAAAAGTCATGGACCAGTATCTGTTGCAAGAGGTGCAAGAGATACAAATGCCCTACAAACTCCAGAGTACAACGCTCAAGGAAATAAATCTGTACAGGTTAATTCAAATACAAAAACGTCTAGTGACAAATATAACTCCAGTGAAGATGGTAGTTCCCATAGGATTGTGCCAGCCAGAGGATCTGTACAAAACGGTCATGATCATCCTACTTGGGCAAAGCAAACCGCTGCAACAGGATCGCCGTTGAATAAGAGATCAGAGTTCAGGGGGAAGAATACAGAGTTAAGGACACAGAGATCTAATGTAAACCAGGCAGCAGCAGATTTTTCTGACCCTCATCTAAACAAGGGTTACATTCCCAAGAAAAATAGGATGCACCACTCTGGACCATTGGTGCCACCTGGAGGTAACATTGATGACATGCTCCGAGAGCACGAGAGATTAATGCAAGAGGCATTCCGTACAGTCAAGGACAAGAACAACCCTAAAAAATACCTGGGGGAAATGCTGAGAAGATGA 1878 0.4377 MGCLCSKDKNEVDECDKEEDLTKSSSLQLVAPALSTAPLGGGVDTDGSVNRLLKKYSHTNVNNHYVVDAKPIKGQHQRCASVGEGKGSVSRMLSMSRGTEAEHVAAGWPLWLSSVAGDAIKGWVPRRLDSFEKLGQVGQGAYSSVHKACDLQTGKIVALKKVRFSSSDAESVRFMAREIYILRQLDHPNVMKLEAIVTSRTSSSLYLVFEYMEHDLSGLQALPRMKFTEPEIKCYMQQLLCGLEHCHSHGVLHRDIKGSNLLLNGDGILKIADFGLSTVYQTDKKEPLTSRVVTLWYRPPELLLGATDYGPAIDLWSAGCILAEFLFGKPIMPGRTEVEQMHKIFKLCGSPSEEFWQKTKLPHATSFKPQEPYRRRVSETFRDFSPSALALVEKLLAIEPEDRGSATSALQSEFFTTLPLPCDPSSLPKFPPSKEFDAKLRDEEARRKNNEAVKSHGPVSVARGARDTNALQTPEYNAQGNKSVQVNSNTKTSSDKYNSSEDGSSHRIVPARGSVQNGHDHPTWAKQTAATGSPLNKRSEFRGKNTELRTQRSNVNQAAADFSDPHLNKGYIPKKNRMHHSGPLVPPGGNIDDMLREHERLMQEAFRTVKDKNNPKKYLGEMLRR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0445 625 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0445 625 MobiDBLite consensus disorder prediction 445 551 - -
Lele30g0445 625 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0445 625 MobiDBLite consensus disorder prediction 466 505 - -
Lele30g0445 625 MobiDBLite consensus disorder prediction 520 539 - -
Lele30g0445 625 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Lele30g0445 625 CDD STKc_CDK9_like 131 415 - -
Lele30g0445 625 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0445 625 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Lele30g0445 625 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Lele30g0445 625 SUPERFAMILY Protein kinase-like (PK-like) 124 423 IPR011009 -
Lele30g0445 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Lele30g0445 625 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Lele30g0445 625 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Lele30g0445 625 Gene3D Transferase(Phosphotransferase) domain 1 214 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0445 Lele-ChrLele30 9437741 9442319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0445 123 463 Core Cell Cycle Gene Families AT5G10270 51.111 3.89e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele30g0445 Pkinase 6.1e-69 CL0016