Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0441 ATGAGTTGCAGCTTCGGCGACAACAATGGAGGAAGAGTCACAAACAGGGACAGCGCCGTCAAGTACAAGGGAGTCCGGCGAAGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTCCCGGGGTCACAAGAGCGGCTGTGGTTGGGTACCTATGCATCGCCGGAGGCGGCAGCGGTGGCTCATGACGTGGCTTTCTACTGCTTGAGGAGACCGGCGACATTGGAGAAGCTCAACCTCCCAGAGATGTTGCCTTGTTGTTATGTCTGGCAGCATCGAGAAATGTCGCCGAGGTCCGTGCAGACGGCGGCGTCAAATGCTGGCGTGGCGGTTGATGCGCAGAGGATTGTAGAAGCAGACGAGAAGAATGAGAAAACTGATGAGAACAGAGAAAACAGAGACATGAATGATGGATTTTGGTGGGACTGGAATGGTGACGACGGGGGCGGTGACGGCCCTTTTTGGCCAGGAATTGATGAAGGTTGTACACAAGGAGAAGAATCGAGCATTTCCATTGATGATTATTTTCAGGATCTTCAACATTTTTAG 546 0.5275 MSCSFGDNNGGRVTNRDSAVKYKGVRRRKWGKWVSEIRVPGSQERLWLGTYASPEAAAVAHDVAFYCLRRPATLEKLNLPEMLPCCYVWQHREMSPRSVQTAASNAGVAVDAQRIVEADEKNEKTDENRENRDMNDGFWWDWNGDDGGGDGPFWPGIDEGCTQGEESSISIDDYFQDLQHF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0441 181 MobiDBLite consensus disorder prediction 119 138 - -
Lele30g0441 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 125 - -
Lele30g0441 181 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Lele30g0441 181 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele30g0441 181 MobiDBLite consensus disorder prediction 119 136 - -
Lele30g0441 181 SUPERFAMILY DNA-binding domain 21 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0441 Lele-ChrLele30 9414781 9415326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0441 12 122 AP2-EREBP Transcription Factor Family AT1G22810 57.658 1.01e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele30g0441 AP2 5.4e-11 CL0081