Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0434 ATGGAAGAAGAAGCGAACTGCAATTCACAAGGATGTGTCATGGATTCTCCGGTTCCGGCGGCATCGTCATACCGGGGAGCTCGAAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGAGAGCCCGGCAAGAAAACTCGGATATGGTTAGGAAGCTATGAGGCGCCGGAAATGGCGGCAGCGGCGTATGATGTTGCAGCATCACACTTCCGAGGACCGTCGGCACGACTTAACTTCCCGGAGTTCTTAGGAGCTCTTCCACAGCCAGCGAGCTCTCAAGTGGAGGATGTCCGGTTCGCAGCCCAACAAGCTGCATTAATGTTCAGAAGACCATTAAGATCATTTCGTCAATCACCAAGGGAGGCCCAAGAAGGCGGCGGCATGGTTCCGGCGGCAACCGTGGGCCCGTCATCACCGAGCGAGAATCAGGCGATAAATGAGTCACCGTTGGCGATGTGGATACAAATGGCTGAAGCGTTCATGTTAGGGCTTGAGGATGAGTCTATAGCATTATATAACGACGACGATGACGACGGATTGGAACTGAGAAGATGGGAAGAAATACTGAATGATCCAATGTGGGCTTTCTAA 591 0.5228 MEEEANCNSQGCVMDSPVPAASSYRGARKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAASHFRGPSARLNFPEFLGALPQPASSQVEDVRFAAQQAALMFRRPLRSFRQSPREAQEGGGMVPAATVGPSSPSENQAINESPLAMWIQMAEAFMLGLEDESIALYNDDDDDGLELRRWEEILNDPMWAF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0434 196 MobiDBLite consensus disorder prediction 117 142 - -
Lele30g0434 196 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele30g0434 196 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Lele30g0434 196 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Lele30g0434 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 128 - -
Lele30g0434 196 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Lele30g0434 196 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lele30g0434 196 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele30g0434 196 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
Lele30g0434 196 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele30g0434 196 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0434 Lele-ChrLele30 9354631 9355221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0434 22 194 AP2-EREBP Transcription Factor Family AT1G71450 46.243 3.05e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele30g0434 AP2 3.5e-10 CL0081