Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0432 ATGGATAGAAACTTTTCTGATGTCCACATATCACATGGTTATAATGTAAATGTTCCACTTCTATGTCGTGATAATTTGAGTAGTGGCAACAGTGAGACAAATGTGACCCGAAGCCAAAATACTGTAAGAGAGATACTGCACTGTTTCCAAGCTGTTTGTAGAAAATTGTTGGAAGAAGAAGCAAAGTCAAAAGGCGAAGCAAAAATTCATAGGAGGATTGATTTAGAGGCAGCAAAGATCCTTAAAAATGAAGGCAAATATGTTAATGTAGACAAGCCGATCTTTGGTTCTGTCCCTGGGGTTGAGATAGGTGATGAGTTTGATTACAGAGTGGAGCTTAATCTAGTCGGTCTTCATCGCCATTTACAGGCCGGCATAGATTATGCAATGTGCGATGGTGTGCTCCTTACTGCTAGTATTGTTGCATCAGGGGGATATGATGATGAGTTGAATAATTCAGGTGTCTTGATTTATTTGGGGCACGGAGGCAATTCGATTTACTCTAAGAAAAAACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTATCGATAAAAGAAATCATGTAAGAGTGATACGTGGTGACGAAGAATCAGACTTTGAGCTGGAGATGAAACTTACAAGCCATGAGAGTGAAGGTCGAAAGCATGCAGCAAAGGACATGGAGGATGGTACTGATGCAAGGCTTTGGAGAGATAAGTGGGTGAAGGGAGTGGATGGAGTGTTATCTCAGACTTTTGTGGAAGGGAAAGTGTTTGATGAATATCAGATAGCGTATGTTGCTTTGATAATATGGTTGATCTGGAAAGGAAGGAACAGTTTGATTTTTGAGTATAAATTGCCTGACCATATGACAGTAGTGATTGTGGCAGGGAAAGCAGTGGATGAATTTTGGAAAGCTAAGGCTTCCTTTCCGGGTATGGTCAAAATTAATTGTGACGGATCCTATAAACCAGAATCAGCTGCTATTGGTTTAGTATGTAGGATTGTGGAAGTTGCTCTGGTGACAAGAAAGAGTAATATGGCAGCTGGAGATGAAACTTATGAAAAGCATGCAGCAAAGAACATGGAGTCTATCGATGGCGATTTACATACATTAAAAAGAAACTCCATAGCTCTGTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGTTGTTCATGAGACTAATCAAAATAAGCAGTTGTTTCTGGGTGATTTATTGTCCTCGTTCTCTTTAAGTCGTGGTCGTCACCACCACCACCACGACCATCATTCCCATAAGAAACGACCCGATGATAGCAGCAGCAGTGATATTAGCGATATATGTGATGATTTTCCCCCGGGAATTCCACCGCCAAATACCAACACGACGACGTATCTTGAGAAAGTGATGGTGCCAAGAAGTAAACCAAACATCACATTTCAAGGACAAGGCAACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCGGTACAAGTCTTCGCCTCCAACTTCATTGCCAGAAACATAAGCTTCATGAATGTGGCGCCAATTCCAGGTCCTGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAATAGGGGGTGATCAAGCTCAGTTCTGGGGATGTGGCTTTTTTGGTGCACAAGATACTCTTCATGATGATAGGGGTCGCCATTACTATAGGGATTGCTATATTCAAGAATTGTCAACTGGTGTTAATGGCAAACCCAGTACCACCGGGGCAAAAGTTGGAATGACTTCAATGACCATGCAAGAGATCACTCCAGCTATGGCGTCTTTCAATGAGGCACCTCCTGGTAATCCCCAGGTTGGCGAGAAAATCTTCAAGACCAAGTGCGCTCAGTGCCACACCGTCGTCAAAGGTGCTGGCCACAAGCAAGGACCCAATCTAAATGGTTTGTTTGGAAGGCAATCTGGCACTACTCCTGGATATTCCTATTCTGCTGCAAACAAGAACATGGCTGTGATCTGGGAGGAAAAGACTTTATATGATTACTTGCTCAACCCCAAAAAGTTCCAGAGATTGAATTTTCAAACGTTTAGTTCTGCAACAAGTACTATGTCTTTGCAAATAAAATATAGACTAGATAGATTCACAATGCCCTTTTGTCCGTTTAGCATAGCTACTCATTGTTGTCCCAATAGGGTTGGTTTCCTTGTAATGGCTGAATTGAATCAGCTATTGGCTCAAATTTTATCAAATATTGGAACTGTGAAGCAAGCTTTGGTCAGGTTTCTGCTTGATAAGGGAATTCATTTTTCAGTACTTGCATTATAA 2316 0.4193 MDRNFSDVHISHGYNVNVPLLCRDNLSSGNSETNVTRSQNTVREILHCFQAVCRKLLEEEAKSKGEAKIHRRIDLEAAKILKNEGKYVNVDKPIFGSVPGVEIGDEFDYRVELNLVGLHRHLQAGIDYAMCDGVLLTASIVASGGYDDELNNSGVLIYLGHGGNSIYSKKKPEDQKLERGNLALKNSIDKRNHVRVIRGDEESDFELEMKLTSHESEGRKHAAKDMEDGTDARLWRDKWVKGVDGVLSQTFVEGKVFDEYQIAYVALIIWLIWKGRNSLIFEYKLPDHMTVVIVAGKAVDEFWKAKASFPGMVKINCDGSYKPESAAIGLVCRIVEVALVTRKSNMAAGDETYEKHAAKNMESIDGDLHTLKRNSIALLVIPIIAVFAYFIVVHETNQNKQLFLGDLLSSFSLSRGRHHHHHDHHSHKKRPDDSSSSDISDICDDFPPGIPPPNTNTTTYLEKVMVPRSKPNITFQGQGNTSTAIAWNDTAKSANGTFYSGSVQVFASNFIARNISFMNVAPIPGPGVEGAQAVAIRIGGDQAQFWGCGFFGAQDTLHDDRGRHYYRDCYIQELSTGVNGKPSTTGAKVGMTSMTMQEITPAMASFNEAPPGNPQVGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKFQRLNFQTFSSATSTMSLQIKYRLDRFTMPFCPFSIATHCCPNRVGFLVMAELNQLLAQILSNIGTVKQALVRFLLDKGIHFSVLAL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0432 771 Pfam SAD/SRA domain 95 201 IPR003105 -
Lele30g0432 771 Pfam Pectinesterase 458 572 IPR000070 GO:0030599|GO:0042545
Lele30g0432 771 MobiDBLite consensus disorder prediction 416 456 - -
Lele30g0432 771 ProSiteProfiles YDG domain profile. 96 241 IPR003105 -
Lele30g0432 771 Gene3D - 603 706 IPR036909 GO:0009055|GO:0020037
Lele30g0432 771 SUPERFAMILY Pectin lyase-like 459 573 IPR011050 -
Lele30g0432 771 PRINTS Class IA and IB cytochrome C signature 624 631 IPR002327 GO:0009055|GO:0020037
Lele30g0432 771 PRINTS Class IA and IB cytochrome C signature 667 683 IPR002327 GO:0009055|GO:0020037
Lele30g0432 771 PRINTS Class IA and IB cytochrome C signature 637 652 IPR002327 GO:0009055|GO:0020037
Lele30g0432 771 PRINTS Class IA and IB cytochrome C signature 653 663 IPR002327 GO:0009055|GO:0020037
Lele30g0432 771 SUPERFAMILY Cytochrome c 611 688 IPR036909 GO:0009055|GO:0020037
Lele30g0432 771 Pfam Cytochrome c 617 675 IPR009056 GO:0009055|GO:0020037
Lele30g0432 771 SUPERFAMILY PUA domain-like 87 200 IPR015947 -
Lele30g0432 771 Gene3D - 454 574 IPR012334 -
Lele30g0432 771 ProSiteProfiles Cytochrome c family profile. 612 748 IPR009056 GO:0009055|GO:0020037
Lele30g0432 771 Gene3D - 78 222 IPR036987 -
Lele30g0432 771 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 36 214 - -
Lele30g0432 771 SMART G9a_1 91 227 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0432 Lele-ChrLele30 9318946 9330898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0432 442 613 Carbohydrate Esterase AT1G05310 50.952 1.86e-58 202