Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0431 ATGCTTAGGAAGCCATCTGCAATTCGTGATTACCCAGCTGGTGTTGGACGGACTGCAGCAAGAATCCATGTTACACCTAAAGAAGATACTACTAGGGGTGGTGAGGATAGTTTGAGTCATTATTCACAGAAGGCTGCGACTAGGAGATTTCTTTCTGCCGTTAGAGACTATCCTCCATTTTGTGGACCTAATTCTCGGAGTCTGAATAAGGGAGATGTTTCCAAGGGCAAGCTCATGGATAGGCATTTGAGTGGTGGTATGGAAGAAAGGAAGAGAAAACTTGATTGCCTCTCACAGGGTGATGGGTCTAAAGCTGTGTTGAGGACTAAAGACTCTTTGAATCATCCCAAGATGAAGGTTATGAAAAAGAAAGAAGGAAATGTTGCTTCTGGAGGTATTGGTAAACTTGTAGCTTTAGAAAAAAATGGTCTTAATACCAATTATAGTAGAAAATTTTCTGATGGCCTTAGATCATATGGTGTAAATGTTCCATTTCTGCATCATCATAACTTGAGCATTCACAACAATGACTTAATTGTGACACGAAATACTGTAAGAGACACATTGCGCTTGTTCCAAGCTCTTTGTAGAAAATTGCTGCAAGAAATAGAAGCAAAGTCAAAAGGCCAAGCAAAAATTCGCAAGAGGGTTGATTCAGAGGTAGCAAAGATCCTCAGGTATGAAGGGAAATATGTAAATGCAGGCAAGCAGATCTTCGGTTCTGTCCCTGGGGTTGAAGTAGGTGATGAATTTGATTATAGGGTGGAGCTTAATATTGTTGGTCTTCATCGCCAAACACAAGCTGGCATAGATTTTGCGAAGGTCAATGGTGAGCACCTTGCAACTAGTATTGTTTCATCAGGGGGATATGATGATGAGTTGGATACTTTGGGTGTTTTGATTTATTCAGGGCATGGGGGGAATGTGATGAACAATAAGAAAGACCCTGAAGATCAGAAGCTTAAGCGAGGTAATCTTGCCTTGAAGAACAGTATTGAGAAAAAGAACCATGTTAGAGTGATACGTGGCGCTTTTTTTGGAGATGGAAGTCGTAAGCGATTTGTGTATGATGGATTGTATGAAGTTGAGAGATACTGGCAAGAAATGGGGCCACATGGAAAGATGATTTTCAAGTTTCAGCTGCAAAGAATCCCAAATCAACCGGAGCTTCCTTGGGTTGAACTGAAGAATTCCAAAATGTTCACATTAAGGAAGGGTTTGTGTGTTGCTGACATCTCACGCGGTAAAGAGGCGTTACCAATTCGTGCTGTGAATACCATAGATAATGAAAAACCACCATCATTTGATTATATTACTAGGATGATCTATCCTGATTGGTTGAATCCAACACCTGCGAAGGGATGTGATTGTACTGACAAATGCTCTGACCTAACAAGATGTTCTTGTGCAGTTAAAAATGGAGGAATCCCATTCAATCACACAGGATGCATTGTAGAAGTAAAGCCTCTGGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAGTAGAGTCAGCCAACATGGCATAAAATTTCCCCTTGAAATTTATAAGACTGACAAAAGGGGATGGGGTGTGAGATCTCTAAGCTCCATCCCTTCTGGTAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACGCGGAAGCTGAACAGAGAATTGGTCATGATGAGTATCTGTTTGATATAGGTAAGAACTTGATCAACAATGGTATACTTTCTGATGGAGTCTCGACGCCTGAAGTCCTTGAGGATGTTGGCGGCTTCACCATTGATGCAGCTAGGCATGGTAATCTGGGCAGATTTTTCAACCATAGTTGCGCGCCTAATATGTATGCACAAAATGTTTTGTATGATCATGGCGACCGCAGGATTCCTCACATAATGCTATTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCGAAAGATCAAATCTTCGATTCTAACGGCAACATAAAAAAGAAGGATTGCTTTTGTGGGTCCGTGGGGTGTACTGGAAGGATGTATTGA 2046 0.413 MLRKPSAIRDYPAGVGRTAARIHVTPKEDTTRGGEDSLSHYSQKAATRRFLSAVRDYPPFCGPNSRSLNKGDVSKGKLMDRHLSGGMEERKRKLDCLSQGDGSKAVLRTKDSLNHPKMKVMKKKEGNVASGGIGKLVALEKNGLNTNYSRKFSDGLRSYGVNVPFLHHHNLSIHNNDLIVTRNTVRDTLRLFQALCRKLLQEIEAKSKGQAKIRKRVDSEVAKILRYEGKYVNAGKQIFGSVPGVEVGDEFDYRVELNIVGLHRQTQAGIDFAKVNGEHLATSIVSSGGYDDELDTLGVLIYSGHGGNVMNNKKDPEDQKLKRGNLALKNSIEKKNHVRVIRGAFFGDGSRKRFVYDGLYEVERYWQEMGPHGKMIFKFQLQRIPNQPELPWVELKNSKMFTLRKGLCVADISRGKEALPIRAVNTIDNEKPPSFDYITRMIYPDWLNPTPAKGCDCTDKCSDLTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYSRVSQHGIKFPLEIYKTDKRGWGVRSLSSIPSGSFVCEYIGELLEDAEAEQRIGHDEYLFDIGKNLINNGILSDGVSTPEVLEDVGGFTIDAARHGNLGRFFNHSCAPNMYAQNVLYDHGDRRIPHIMLFAAENIPPLKELTYDYNYSKDQIFDSNGNIKKKDCFCGSVGCTGRMY 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0431 681 ProSiteProfiles Post-SET domain profile. 665 681 IPR003616 -
Lele30g0431 681 ProSiteProfiles Pre-SET domain profile. 453 512 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0431 681 SMART set_7 515 657 IPR001214 GO:0005515
Lele30g0431 681 SMART preset_2 409 499 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0431 681 Pfam SET domain 526 651 IPR001214 GO:0005515
Lele30g0431 681 Gene3D - 220 403 IPR036987 -
Lele30g0431 681 Pfam Pre-SET motif 412 507 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0431 681 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 73 673 - -
Lele30g0431 681 ProSiteProfiles YDG domain profile. 240 383 IPR003105 -
Lele30g0431 681 ProSiteProfiles SET domain profile. 515 651 IPR001214 GO:0005515
Lele30g0431 681 SMART PostSET_3 665 681 IPR003616 -
Lele30g0431 681 SUPERFAMILY PUA domain-like 229 396 IPR015947 -
Lele30g0431 681 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 104 681 IPR025794 GO:0016571
Lele30g0431 681 Pfam SAD/SRA domain 239 387 IPR003105 -
Lele30g0431 681 Gene3D SET domain 404 681 IPR046341 -
Lele30g0431 681 SUPERFAMILY SET domain 399 658 IPR046341 -
Lele30g0431 681 SMART G9a_1 235 387 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0431 Lele-ChrLele30 9302536 9304581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0431 182 678 Su(var)3-9 homologs AT5G04940 39.884 2.28e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele30g0431 SAD_SRA 3e-49 CL0178