Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0404 ATGGGTGGAAGTTCTATAGATGATGATTGGGAGCTTACTACCTCAACTAATGAGGCCCGGACAGTGGTCTTGGTTGGACGAACTGGTAATGGGAAAAGTGCAACAGGTAATAGTATTCTTGGAAAGAAGGCCTTCAAGTCAAGGGCAAGTTCGTCAGGTGTAACAAGCACTTGTGAATTGCAGAGTACTGTACTCAGAGATGGTCAAATTGTGAATGTTATTGACACCCCAGGACTATTTGATTTTGCTGTGGGATCTGACTTTGTTGGGAAGGAAATTGTAAAATGCATCGATCTAGCCAAAGAAGGGATTCATGCCATCCTTGTAGTGTTCTCTGTTAGAACTCGCTTTTCTCAAGAAGAACAAGCTGCTCTTCGAAACTTACAAACATTGTTTGGAAACAAAATAGTTGATTACATGATTGTGGTCTTCACTGGAGGGGATGAACTGGAAGATAATGATGAGACTTTGGAAGATTATTTAGGTCGTGAGTGCCCAGAGCCTTTAAAGGAAATTCTGGTTTTGTGCAAAAATCGGTATGTCCTTTTCGATAACAAGACTAAGGATGAAAGAAAGCGGTTCGAACAAGTTCGGCAACTTCTTTCTCTTATAAACATGGTCATTACACAGAATGGTGGACAACCTTATATGGATGAGTTATTCACTGAACTGAAGAAAGGAGCGATGAAGCTGCATAACCAACAAATCGAGGTCGAAGCCTTGAAAGGATATTCGAAAAGTGAGATAAAGGAGATGAAGGAACATATGCATCGGACTTATGACGAGCAGCTAAAACGAATTACTGAGATGGTGGAGACAAAGCTGAAGGAAGCAACTGCAAGGCTTGAACAACAATTGGCTGAGGAGCAAGCTGCAAGGCTTAAGGCAGAGGAGAGTGCATTTTTAGCTCAAAAGAGATCAGATGATGAAATTCGGAAACTTCGAGAAAATCTGGAGATGGCACGTGAAGAACTCCGTAAACGAGGTGAACACCGTTGCAACATTCTGTGA 1011 0.4184 MGGSSIDDDWELTTSTNEARTVVLVGRTGNGKSATGNSILGKKAFKSRASSSGVTSTCELQSTVLRDGQIVNVIDTPGLFDFAVGSDFVGKEIVKCIDLAKEGIHAILVVFSVRTRFSQEEQAALRNLQTLFGNKIVDYMIVVFTGGDELEDNDETLEDYLGRECPEPLKEILVLCKNRYVLFDNKTKDERKRFEQVRQLLSLINMVITQNGGQPYMDELFTELKKGAMKLHNQQIEVEALKGYSKSEIKEMKEHMHRTYDEQLKRITEMVETKLKEATARLEQQLAEEQAARLKAEESAFLAQKRSDDEIRKLRENLEMAREELRKRGEHRCNIL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0404 336 ProSiteProfiles AIG1-type G domain profile. 17 225 IPR006703 GO:0005525
Lele30g0404 336 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 21 324 IPR045058 -
Lele30g0404 336 CDD AIG1 20 226 - -
Lele30g0404 336 Coils Coil 304 331 - -
Lele30g0404 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 192 IPR027417 -
Lele30g0404 336 Coils Coil 268 299 - -
Lele30g0404 336 Gene3D - 20 234 IPR027417 -
Lele30g0404 336 FunFam Immune-associated nucleotide-binding protein 9 19 236 - -
Lele30g0404 336 Pfam AIG1 family 20 234 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0404 Lele-ChrLele30 9054566 9059379 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0404 30 9054566 9059379 Lele31g0501 31 13055514 13059813 hybridization
Lele30g0404 30 9054566 9059379 Lele32g0993 32 6893313 6898049 hybridization