Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0385 ATGAAACTCCCTCTGCTACCAGCAGCACACTCTAAAAGCACTTCTCCTTCTTCTTCACCATCATCATCATCAATTCACCAATTCCTTCTTTCTCCTTTTAAATCAACCTCTCCAAACACCTCCTTCTTCATCCCCATCCTCATCCTCATCCTCACACCCTCTTCTCCTTCATCTTCTTCAACACCACCAGCCATGAAACCTCCTCCTTCTCTTTTCCCTCTCACATTCTTCTTCTTCTTCCTCTGTCAGATACAGCTTCTGGTTTTCTCTGCTACACCATCTGTCATCTTCTCTTTGCTTTCTCTCAAATCTTCCCTCATTGACCCTCACAATACCCTCCATGAATGGAACTATTCTTCTTCCTCTAACAATTCTTTCCAAGACCCACCTGTTTGGTGTTCATGGTCAGGTATCACGTGCCACTCACGGACTTCTCAGATTATCACCATTGATCTTTCTCAGCGTAATCTCTCTGGTTTGATCTCTCCCCAAATCCGTTTCTTGACTAGTTTGAACCACTTGAATCTCAGCTGGAATGACTTCACTGGGATTTTCCCACCTGTGATTTTTGAACTCTCTGAGCTCAGAACTCTTGATATCAATCACAACTTCTTCAATTCAACTTTCCCACCTGGGATTTCTAAGCTCAAGTTCTTAAGAGTGTTCAATGGTTATAGCAATAACTTCGTTGGTCCTCTGCCTCATGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTGAACCTTGGTGGGAGCTACTTCAATGGTACAATTCCTTCAGGTTATGGGAATTTACCAAGATTGAAGTTCCTTTATCTTGCTGGGAATCTCTTAGAAGGTCCAATACCATTTCAGTTAGGGTTCTTATCAGAATTGGAACGTCTTGAAATTGGGTACAACCAGTTTTCTGGAGGATTACCTGAAGATTTCGCATTATTATCAAGCCTGAAATACCTGGATATCTCTTCTTCTAACATTTCTGGCTCTCTGATTCATGATTTGGGAAACATGTCTATGTTGGAGACATTGTTGCTGTACAAGAATCAGTTAGTGGGTCAGATTCCATCAAGCTTGGGGAATTTGAAAAGTCTAAATGCACTTGATTTGTCAGATAACAAACTCAGTGGGTCAATTCCTGAAGAAATTTCAATGTTGAAGGAACTAACCATTTTGAGCTTGATGAACAACAAGTTAACAGGAGAGATACCACAAGGGATCGGAGATCTTCCCAAACTCGATACTCTGCTTCTTTGGAACAATTCGCTTTCTGGAATTCTCCCACAAACCCTAGGCTCCAATGGATTACTCCAGAAACTCGACTTTTCCACGAATTCACTCACAGGTTTAATTCCACCAAGTGTTTGCAATGGAAGCAAGCTTTTCAAGCTCATTCTGTTTGATAACGAATTTGAAGGAGCTTTTCCAGAATCACTCACTAATTGCACTTCATTGGTAAGACTTCGAATTCAAAACAATCGGCTCAATGGATCCATCCCTGGTGGTTTAGGCCTTCTTCAGAATCTCGCCTTCGCCGATATGAGCAACAACAACTTCACCGGTCGGATTCCGGAAGATTTCGGTGATGCTCCGACATTGCAACACTTGAATCTCTCTGGGAATTCTTTCGAAAATCCACTACCTAGCAATATTTGGAACGCGAGGAATTTACTGGTTTTCTCGGCGAGTTCATCGAAAATTAACGGTCAAATTCCAGATTTCCTAGGATGCAAGAACATTTACAGAATCGAATTGCAGGGGAATTTCATCAATGGGAGCATCCCTTGGAGCATTGAGAACTGCGAGAGGCTTATTGTGTTGAATCTGAGTCGTAATTCGCTTTCTGGTATCATCCCCATGGAAATCTCTGTTTTACCCTCAATCACTGATGTTGACCTATCGCACAACTTTCTCTCCGGCACCATACCCACCGGTTTCAACAACTGCACCACCCTCGAGAACTTCAACGTCTCCTTCAATTCCCTCACCGGACCAATTCCCTCCGCCGGTTCAATCTTCCCGAACTTAAATCCTTCCTCCTTCTCCGGCAATGATGACCTCTGTGGCGGCGTCCTCGCAAAGCCCTGCGCCATGGACACGACTCTCTCCCCTCCAACTGAGGATCAACAACATGATCATCCCAAGAGAACCAAAAGTGCAGTTATGTGGATCGTTGCAGCGGCGGTGGCAGTCTCATTGTTCGCGCTAGTCGCCGGAACCCGATGCTTCCGATATCAACACGGCCGTCCGTTCATGAACAACCGCGAGATCGGACCGTGGAAATTAACCGCGTTCCAACGGTTGAATTTTACGGCAGAGGACGTGGTTGAGTGCATGACAGGGTCAAACAAAATCATAGGAATGGGGTCCACTGGAACAGTGTTCAAAGTCGAGATGCCCAGTGGTGAGATCATAGCCGTTAAAAAGCTATGGGGAAAACAAAAGGAGACCTCTAACTGCACCATCCGACGCCGGAGAGGGGTGCTAGCTGAAGTGGCTGTATTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGAACACCATGCTGCTCTATGAGTATATGCCCAATGGGAATTTAGAAGACTTGTTGCATGGCAAGAATGTGGTTGGTGATTGGTTGACCAGTTGTGTGGTTGAATATGCATACACCCTACAAGTTGATGAGAAGAGTGATATCTATAGCTATGGAGTGGTGCTAATGGAGATTTTATGTGGAAGAAGATCGGTCGATGCAGAGTTTGGTGATGGAAATAGTATTGTGGACTGGGTTAAGTCTAAGATCAAGATAAAAAATGGGATTGATGGCATATTGGATAAGAATGTCGGCTCCGGTTGTGCTCCGGTGAAAGATGAGATGAAAGGGATGCTGAGAATCGCGTTGCTTTGTACCAGTCAGAATCCAGCGGACCGGCCTTCCATGAGAGATGTTGTGATGATGCTTCAAGAGGTCAAGCCGAAGAGGAAAATGTTTGATAATATTGTGTTAGGACAATGTGGTGGTAAAGATGTTAGTGGTGGGGAGGAGGAGGATATCGTTTTGCCTCAAAAGGCAAGAGTGGAAATTTAA 3087 0.4448 MKLPLLPAAHSKSTSPSSSPSSSSIHQFLLSPFKSTSPNTSFFIPILILILTPSSPSSSSTPPAMKPPPSLFPLTFFFFFLCQIQLLVFSATPSVIFSLLSLKSSLIDPHNTLHEWNYSSSSNNSFQDPPVWCSWSGITCHSRTSQIITIDLSQRNLSGLISPQIRFLTSLNHLNLSWNDFTGIFPPVIFELSELRTLDINHNFFNSTFPPGISKLKFLRVFNGYSNNFVGPLPHEFMRLRFLEKLNLGGSYFNGTIPSGYGNLPRLKFLYLAGNLLEGPIPFQLGFLSELERLEIGYNQFSGGLPEDFALLSSLKYLDISSSNISGSLIHDLGNMSMLETLLLYKNQLVGQIPSSLGNLKSLNALDLSDNKLSGSIPEEISMLKELTILSLMNNKLTGEIPQGIGDLPKLDTLLLWNNSLSGILPQTLGSNGLLQKLDFSTNSLTGLIPPSVCNGSKLFKLILFDNEFEGAFPESLTNCTSLVRLRIQNNRLNGSIPGGLGLLQNLAFADMSNNNFTGRIPEDFGDAPTLQHLNLSGNSFENPLPSNIWNARNLLVFSASSSKINGQIPDFLGCKNIYRIELQGNFINGSIPWSIENCERLIVLNLSRNSLSGIIPMEISVLPSITDVDLSHNFLSGTIPTGFNNCTTLENFNVSFNSLTGPIPSAGSIFPNLNPSSFSGNDDLCGGVLAKPCAMDTTLSPPTEDQQHDHPKRTKSAVMWIVAAAVAVSLFALVAGTRCFRYQHGRPFMNNREIGPWKLTAFQRLNFTAEDVVECMTGSNKIIGMGSTGTVFKVEMPSGEIIAVKKLWGKQKETSNCTIRRRRGVLAEVAVLGNVRHRNIVRLLGCCSNRENTMLLYEYMPNGNLEDLLHGKNVVGDWLTSCVVEYAYTLQVDEKSDIYSYGVVLMEILCGRRSVDAEFGDGNSIVDWVKSKIKIKNGIDGILDKNVGSGCAPVKDEMKGMLRIALLCTSQNPADRPSMRDVVMMLQEVKPKRKMFDNIVLGQCGGKDVSGGEEEDIVLPQKARVEI 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0385 1028 SMART LRR_typ_2 168 187 IPR003591 -
Lele30g0385 1028 SMART LRR_typ_2 360 384 IPR003591 -
Lele30g0385 1028 SMART LRR_typ_2 288 311 IPR003591 -
Lele30g0385 1028 SMART LRR_typ_2 408 431 IPR003591 -
Lele30g0385 1028 SMART LRR_typ_2 623 646 IPR003591 -
Lele30g0385 1028 SMART LRR_typ_2 192 216 IPR003591 -
Lele30g0385 1028 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 400 678 - -
Lele30g0385 1028 Pfam Leucine rich repeat 577 634 IPR001611 GO:0005515
Lele30g0385 1028 Pfam Leucine rich repeat N-terminal domain 98 140 IPR013210 -
Lele30g0385 1028 ProSiteProfiles Leucine-rich repeat profile. 362 384 IPR001611 GO:0005515
Lele30g0385 1028 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 747 860 - -
Lele30g0385 1028 Gene3D Ribonuclease Inhibitor 225 326 IPR032675 -
Lele30g0385 1028 SUPERFAMILY Protein kinase-like (PK-like) 782 990 IPR011009 -
Lele30g0385 1028 ProSiteProfiles Protein kinase domain profile. 778 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0385 1028 SUPERFAMILY L domain-like 435 687 - -
Lele30g0385 1028 Gene3D Transferase(Phosphotransferase) domain 1 770 883 - -
Lele30g0385 1028 Gene3D Ribonuclease Inhibitor 327 386 IPR032675 -
Lele30g0385 1028 Gene3D Ribonuclease Inhibitor 97 220 IPR032675 -
Lele30g0385 1028 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 138 332 - -
Lele30g0385 1028 FunFam LRR receptor-like serine/threonine-protein kinase EFR 406 699 - -
Lele30g0385 1028 SUPERFAMILY RNI-like 150 494 - -
Lele30g0385 1028 ProSitePatterns Protein kinases ATP-binding region signature. 784 807 IPR017441 GO:0005524
Lele30g0385 1028 MobiDBLite consensus disorder prediction 1 22 - -
Lele30g0385 1028 Pfam Protein kinase domain 781 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0385 1028 Gene3D Transferase(Phosphotransferase) domain 1 884 1002 - -
Lele30g0385 1028 Gene3D Ribonuclease Inhibitor 387 700 IPR032675 -
Lele30g0385 1028 FunFam LRR receptor-like serine/threonine-protein kinase 334 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0385 Lele-ChrLele30 8693987 8698908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0385 886 995 Receptor kinase-like Gene Family AT1G08590 49.091 7.43e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele30g0385 Pkinase 4.4e-14 CL0016