Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0371 ATGGATAAGACCTTGGTGTACCAGATGGAGTCCTTATCAATGGGAAAGGACCTTACCCATACAACACCACTTTGGTACCTGATGGCATCCAATATGAAACTATTAATGTTGATCCAGTGTTATTCATTCCTTGTTTCTATGGACCAAAACGCAAGTTCAGACTACTATATTGTAGCAAGTGCCTGGTTTGTGAATGGATCATTGTGGCAGAGAGTCACGGGGGTAGCGATCTTGCATTATTCTACTTCCAAGGGACCTGCTACTGGTCCTCTGCCAAATCCCCCAAATGACGTATACTACAAAGAGGAATCAATGAATCAAGCACAAAGTGTGAGGTACCAGCGGTCATCAGTGAAGGCACATCTTGTGGTGGCTCAAGACGTCACGGGGCATTTCAAGACGGTGCAAGCGGCCATTGATGTAGCGGCAAGGAGAAGAGTGAAGACGAGGTTAGTGATAAGAGTGAAGAAGAAAGGGATATATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTGTTGGAGATGGCACCAGACTCACCATTATTACCGGCAGTAGAAGCTTTAAAGAAGGAATTACGCCCGCTAGTTCTGCAACAGCAGGTATAGATGGTGCTCGCTTCATTGCACATCACTTTCAGAAACACGGCGGTTCCCGAAAAGGCCAAGCGGTGGCTCTCCGATCAACCTCCGAGCTCTCCGTCTTCTACCGAATTCTTGTAAGAAAGCCACTTCAAGGGCAAGCCAACATGATCACAGCACAGGGACGAGGCGACCCGTTTCAGAACACCGGAATATCGATCATCAATTCTCAGCTTCGAGCGGCGCCAGATTTCAGGCGGGTTTCAAAGTCATTTGAGACCTATTTGGGTCGGCCATGGCAGCAATATGCAAGAGTGATTGTCATGAAGACTTACATAGAAGGATTGGTGAATCCAAAGGGCTTGTCTCCATGGGGCGAAAGTGATAATTATGCTCAAGATACGTTCTATTTTGGGGAATATATGAACTTTGGGGCTGGTTCTTCCACAAAAAGTAGGGTTCAATGGCAAGGGTTTCATGTTATAAGTAATCCAAATGAGGCAAACCAGTTCAGCGTTGCTGCTTTCCTTTCTGGTCGCACATGGATGCCTCGCACTGGGGTACCTTTTAGTACTGGTGTTTAA 1176 0.4575 MDKTLVYQMESLSMGKDLTHTTPLWYLMASNMKLLMLIQCYSFLVSMDQNASSDYYIVASAWFVNGSLWQRVTGVAILHYSTSKGPATGPLPNPPNDVYYKEESMNQAQSVRYQRSSVKAHLVVAQDVTGHFKTVQAAIDVAARRRVKTRLVIRVKKKGIYEENIEVDKDNENLMIVGDGTRLTIITGSRSFKEGITPASSATAGIDGARFIAHHFQKHGGSRKGQAVALRSTSELSVFYRILVRKPLQGQANMITAQGRGDPFQNTGISIINSQLRAAPDFRRVSKSFETYLGRPWQQYARVIVMKTYIEGLVNPKGLSPWGESDNYAQDTFYFGEYMNFGAGSSTKSRVQWQGFHVISNPNEANQFSVAAFLSGRTWMPRTGVPFSTGV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0371 391 Gene3D - 38 117 IPR008972 -
Lele30g0371 391 Gene3D - 243 391 IPR012334 -
Lele30g0371 391 Gene3D - 118 242 IPR012334 -
Lele30g0371 391 Pfam Pectinesterase 242 376 IPR000070 GO:0030599|GO:0042545
Lele30g0371 391 PANTHER PECTINESTERASE 242 381 - -
Lele30g0371 391 SUPERFAMILY Pectin lyase-like 118 390 IPR011050 -
Lele30g0371 391 Pfam Multicopper oxidase 38 82 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0371 Lele-ChrLele30 8511142 8518001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0371 88 389 Carbohydrate Esterase AT5G51500 48.851 5.69e-101 308