Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0353 ATGCATCTATTAAGTATGGAGGCCTCATCCAGTACATGTGAGATAGTGGAATCAAGAGAAGAGATTATTTCTGAGTACAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGATCAGGGAAAAAGTATTATGTAGAGGATGATATTGATCGTCTCTTCCAAACTATTGACTTCAAAAATTCAGCTAGAGGTTCTAGTACGCCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTAAGTTCATCTCAGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAGGCGCTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTATCAAAGCCATCCAGTTCGTCTAGAGCATCCGAGGCAGGAACTATTAAGAAGCTGTATACAGCAGTGGTAGATGAGGGTAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCTGAGATATCTGTGCCTTCCGCTAAAATGCCTAGGGAAGATAAGTCAAGTGCTGATCATTCTACTAATTTTGTGGATGTAATTAACCCAAAAACAGTCAAAACCAGGATAGCATCCCAGGATCAGATTGTTCCTCTTCAATCGGAAGGTGAAGGTGAGAAGTTAGCTGCAGTTGCTGGAAAGCCGGTACTTCCAAATCCATCTAGAGTTGATTTTGAAAGTGAGGAAATGTCTGAGGTCAAGATTGTTCCTGCTTCCTCAAGCAAAGGTTCCCACTGTTCTACAATGCTAGTTAAGGGGCAGGAAGTAGAGTTACATTCTGAAGCTAATCAACCAAGCTCTAGTACAAACAGTGGAGTGGAGAAATCTACAAGCAGTACTACATGCTTGTCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAAGTAAAGCAAGAATTATGTTCTACCTCAAGTGGCTCCACACTATGTACCAAGAAAGTTGACAATGACTTGGATCCTAGTACGAGTAATTTGAACAAGGAGAGTGATAAATATAATTTGAAGCAGGAAATGAAAGAGAATGATAAATTGTCTCCCTGCAGTTCAAATCATAGTGTTGAAGTAAATTCAAATAATGTGGGTACAGATTCAATCAAAACTGGTTTCAGTATGAATTGCAGTAAGAAACCTAAATTTCTAGTGACAAAAATTAATGAAAAATCAAGATCAAAAGAAAAGGGGGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGTAGCACGACAAGCATAAGTGAAGAGAGCAATCTGAGTGGCTCTAGTCGTACTGGCCACAGACCTCACATGTCGAAACACCTGAGATGGGAAGCTGTTCGTGCTGTTCAACAGCAGCATGGGAACTTAAGTTTGAAACAATTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCTTTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAATTTTTAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACACTTTATGCCTATATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTGCATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTGGAGTATTTGCATATGCTAGGAGTCATATATCGAGACCTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGTTGACAGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCAACGTTGGTCAAGTCATCTTCGCCGGATGTGGATTCAACAAAGAAGATGTCCAGTCCCTGTGCGGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTGATTGGCAAGTGTCCTGTTTCACTCCTATTCTTTTATCTGCTGGAGCAAAATCTCGAAAGATGAAATCCGAGGCTGTCCAGGTTGGACCCCTGCCACAACTTGTCGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTAGGTACCTACGAATACCTCGCTCCGGAGATCATCAAAGGCGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTGTATGGCAGGACTCCCTTCAAAGGAGCTGGAAACGAGGAAACATTATCCAATGTTGTGTCACAGAGCCTTAAGTTCCCAGATGCTCCTCTCGTCAGTTTTCACGCGAGAGATCTGATACGCGGATTGTTGATAAAAGACCCGGAGAATCGGTTAGGTTCCGTAAAGGGCGCCGCAGACATAAAACAACACCCTTTCTTCGAAGGCCTAAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGCTGCCCAGGTTTCGTGATTTTGGAAGCTGTGTTCCACCTATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2535 0.4316 MHLLSMEASSSTCEIVESREEIISEYRMDEKAESSCAHRSGKKYYVEDDIDRLFQTIDFKNSARGSSTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISVPSAKMPREDKSSADHSTNFVDVINPKTVKTRIASQDQIVPLQSEGEGEKLAAVAGKPVLPNPSRVDFESEEMSEVKIVPASSSKGSHCSTMLVKGQEVELHSEANQPSSSTNSGVEKSTSSTTCLSKPMFRNMSFLRKKVKQELCSTSSGSTLCTKKVDNDLDPSTSNLNKESDKYNLKQEMKENDKLSPCSSNHSVEVNSNNVGTDSIKTGFSMNCSKKPKFLVTKINEKSRSKEKGEFSQSSKSSIGEYSSSTTSISEESNLSGSSRTGHRPHMSKHLRWEAVRAVQQQHGNLSLKQFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKIFRAQTEREILQMLDHPFLPTLYAYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVDSTKKMSSPCAEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSEAVQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGAGNEETLSNVVSQSLKFPDAPLVSFHARDLIRGLLIKDPENRLGSVKGAADIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCVPPMASQKENANDLEDTEDCEEFELF 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0353 844 CDD STKc_phototropin_like 458 816 - -
Lele30g0353 844 SUPERFAMILY Protein kinase-like (PK-like) 434 811 IPR011009 -
Lele30g0353 844 MobiDBLite consensus disorder prediction 344 365 - -
Lele30g0353 844 FunFam Serine/threonine-protein kinase D6PK-like 458 543 - -
Lele30g0353 844 MobiDBLite consensus disorder prediction 401 431 - -
Lele30g0353 844 Pfam Protein kinase domain 690 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0353 844 Pfam Protein kinase domain 461 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0353 844 MobiDBLite consensus disorder prediction 349 365 - -
Lele30g0353 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Lele30g0353 844 Gene3D Transferase(Phosphotransferase) domain 1 544 809 - -
Lele30g0353 844 FunFam serine/threonine-protein kinase D6PK-like 544 611 - -
Lele30g0353 844 MobiDBLite consensus disorder prediction 261 283 - -
Lele30g0353 844 FunFam serine/threonine-protein kinase D6PK-like 688 811 - -
Lele30g0353 844 MobiDBLite consensus disorder prediction 259 283 - -
Lele30g0353 844 MobiDBLite consensus disorder prediction 388 436 - -
Lele30g0353 844 Gene3D Phosphorylase Kinase; domain 1 460 543 - -
Lele30g0353 844 ProSiteProfiles Protein kinase domain profile. 460 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0353 844 MobiDBLite consensus disorder prediction 61 80 - -
Lele30g0353 844 PANTHER FLIPPASE KINASE 1-RELATED 276 812 - -
Lele30g0353 844 SMART serkin_6 460 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0353 Lele-ChrLele30 8334829 8338303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0353 384 844 AGC Kinase Gene Family AT3G52890 66.596 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele30g0353 Pkinase 5e-36 CL0016