Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0348 ATGTTCCGTCATCTCCGTCATGCTCGTGCTTCGTCTGAAACCGCGACGTCTTCTTCTCCCCTTTTCGCCGGCAGCTCCTCTTCTTCGCGACGTTGGGGGGTTTTACTCCTCAGTGCATATGATGTTTCAGGAGATAAGATTTTCCTTGCCAAAGCTAGAGACATTGCAGACAGATTGCTGCGTGCACAGGATTCACCTACAGGAATTCCTTATAAAACAATCAATTTGGCATGTGGAAATCCTCACAATCCTTGTTGGACTGGGAGAGGTAGTTTATCAGTATATCTAATCCTTTCAAATCCTTTATCTTGTTTCAAGGGTGAGAGTATTTTGGCGGATTCTGGCACTGAACAACTAGAATTTAGTGTTCTTTTCCAAAGGACTGGTGACCCAAAGTATCAGCAGAAGGCTGAGAATGTTATAACACAGATTAGTGGAAGAACAGCCTACTCGCCCATCACTCCTGGTGCCATGGGTGACAGCTTTTATGAATACTTGCTCAGAGTTTGGATTCAGGGGAATAAAACTCCAGCTGTAAAACTCTGCAGTTTGAATGAGGAGAAGATCAATGAAAGGTCCTGAGATATTCCTGATGCGATTGCTAATCTGACAAATGCGGACTTTATAAGTTTGAGTAATAATCAGCTTTCTGGACGAATACCTAGAGGCATTGGAAATTTGACTATGCTTCAAGTGTTATATCTTGATCATAATAACTTACAAGATGAAGGACAATCTAAGACTCATACAGAAACAATACCTACTATTGGCTATATTGCACCAGAGTATGGATCTTTTGGAGTTGTTTCAACAAAAGCAGATGTGTACAGTTATGGAATTACATTGATAGAAGTTTTCACAAGGAAAACACCAATAGAAGATATGTTTGTATCAAGGATGAGTTTAAGGAATTGGATTTCAGCAGGACAAATTCTTTTATTACAAAAAGGCCGACGTATCACCGCATCTCCATCGTCCTGGTTGCCACCGTTATTGTCAGAGAGAGAATTCGCGTCTTCCATCTCGTCCTCTAACTGTCCTTTGAAGTCACTTGTTGATGTCGCCACTGTTTGTTCTTCAGACCGTGGCTCCTCGCTGTCACCGGATCTTCGAAGGAGGAGTGGGGATCTGGTCAAGATCTTTGCAGGAAGTATGGATCCCGTCCCGTCCCCGGAGATTTGTGCGGAGGTAAATTTTGCAGACCCAAAGAGACGTTCCGATTGGAGATCTTGTGAGCACGTCGACAACGACGCGAATAACATGGCTGCAGAAACGAAAGAAGAAAGAGAATCTGCAGAACAGCAGCTACGCTCTGAGTGA 1320 0.4333 MFRHLRHARASSETATSSSPLFAGSSSSSRRWGVLLLSAYDVSGDKIFLAKARDIADRLLRAQDSPTGIPYKTINLACGNPHNPCWTGRGSLSVYLILSNPLSCFKGESILADSGTEQLEFSVLFQRTGDPKYQQKAENVITQISGRTAYSPITPGAMGDSFYEYLLRVWIQGNKTPAVKLCSLNEEKINERSXDIPDAIANLTNADFISLSNNQLSGRIPRGIGNLTMLQVLYLDHNNLQDEGQSKTHTETIPTIGYIAPEYGSFGVVSTKADVYSYGITLIEVFTRKTPIEDMFVSRMSLRNWISAGQILLLQKGRRITASPSSWLPPLLSEREFASSISSSNCPLKSLVDVATVCSSDRGSSLSPDLRRRSGDLVKIFAGSMDPVPSPEICAEVNFADPKRRSDWRSCEHVDNDANNMAAETKEERESAEQQLRSE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0348 439 PANTHER MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED 36 177 - -
Lele30g0348 439 Coils Coil 415 439 - -
Lele30g0348 439 Pfam Glycosyl hydrolase family 47 36 175 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele30g0348 439 PRINTS Glycosyl hydrolase family 47 signature 156 173 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele30g0348 439 PRINTS Glycosyl hydrolase family 47 signature 61 80 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele30g0348 439 SUPERFAMILY Seven-hairpin glycosidases 36 177 IPR036026 GO:0004571|GO:0005509|GO:0016020
Lele30g0348 439 Gene3D Transferase(Phosphotransferase) domain 1 232 383 - -
Lele30g0348 439 SUPERFAMILY Protein kinase-like (PK-like) 248 315 IPR011009 -
Lele30g0348 439 MobiDBLite consensus disorder prediction 410 439 - -
Lele30g0348 439 Pfam Protein tyrosine and serine/threonine kinase 241 303 IPR001245 GO:0004672|GO:0006468
Lele30g0348 439 Gene3D - 33 195 IPR012341 GO:0005975
Lele30g0348 439 SUPERFAMILY L domain-like 190 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0348 Lele-ChrLele30 8223264 8240355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0348 36 180 Glycoside Hydrolase AT1G51590 56.790 1.79e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele30g0348 Glyco_hydro_47 1.3e-20 CL0059