LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g0331	ATGGCGAAACAGCTTCGCCATTTTCATCATTTCTTCTTCTTCGTCTTGCTCTTCTTTCTTGCTATCCACCCTACACATCAGTTACAACATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTACCCATCAGCTCTAAGCAGCTTGAGAACCACGAGAGATTTCTGCAACATCGAGGCCACCAACTATTTGACGATAGTCTGCTATGAAGACAACGTAACGCAGCTTCATGTTGTTAGTGACAATGGGGTTTCTCCTTTGCCTCAAGATTTCTCTTCAGTCTCTCTATTTGCCACTTTGGGTACTCTTTCGAGCTTGAAAGTTCTTTCTCTGGTTTCTATGGGTCTCTGGGGTCCCATACCTGAAAGCATTTCTCAACTGTTTTCTCTGGAGATTCTCAACATTAGCTCAAATCATTTCAGTGGAGCCATACCAACCCAACTTTCTCTGTTGAAGAATCTGCAATCATTGGTTATTGATGATAACGATTTCACAGGTGAAATTCCCATGTGGGTAGGTTCGCTTCAAGGTTTAGCTGTGTTGAGTATGAGAAGAAATTTTCTTAGTGGATCTGTGCCAACTTCTGTTAAAGATCTTCAAACTCTGAGGGTGCTGGATCTATCAAATAATCATTTTCATGGTGAACTACCTGGTCTTAGTAATTTGAAAAATCTGCAAATTCTTAATCTTGAAAATAACACATTGGGACCCCATTTTCCTTCTCTACCCACCAAGTTAGTTTCATTAGTGCTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCTTACTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGGTTTGTGGGACCATTTCCACCATCCTTACTTTCTTTGCCTTCCATCAAATACCTTGATGTTTCAGCAAATAAATTTACTGGGATGCTGTTCAGTAATTATACTTGCAGCTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTGAAAGGGGAACTTCCCAGTTGTTTGAAACCAGATAACAAAGTGGTTGCTTTGTATGCTAGAAATTGTTTTTCAAATGGGGGTCAAGATCAGCACCCTTCCACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTATGCCCCATGAACAGAAGCAGAGAAAGAGAACAACTGGTAAAGCGGTTCTTGTGTCAAGTATGGGAGGAATTGTTGGAGGAGCCGTTGTTTTTGGAGTGGTTTTTCTGGTTATTGTACGAGTAAACAAAAAAGGCTCCGTAAAAGCTCCCGAAGGGTCAACATTGGAGCAAGTTATAAGCCAGATGGATGATGAAGATGATGAAGTTAAAAAACCTAGAACTGTACTGTCAGTAATGGAGAATATCATCAGCCTAGTCCCTAAGCCTAACAAGGAATTTGTGAAAACATTTGCAAGATCCATGATGGAGAATGTTGTTAACAGGGTTCACCATAAACATGTGAGACCTGCAAGGTCCATAGTAGAGCATGTCTCATCAGTGAACACAGCAAAACTTCTCACAGATGCAAGGTATATCTCACAAACAATGAAGATGGGTGCCAGCCTTCCTTCCTATAAGACTTTTGCTTTGGATGAACTCAAGGAGGCTACAAACAATTTTGATGTATCATGTTTTATAAGCGAAGGTGCACGTGGTCAGATCTACAAAGGGTCGCTCTCTGATGGAACTCAGATTGCTATCAGAAGTTTGAAAATGAAGAAAAGACATGGCCCTCAGAACTATATGCATCATATTGAACTGATTTCAAAACTGAGGCATCCACACTTGGTCAGTGCTCTAGGACATTGCTTTGAGGGCAACCACGAGGATCCAAGTGTCAACAGTATATATCTCATATTTGAGTTTGCACCATACAGAAGTTTAAGAGGCTGCATATCTGGATCTTCTGGAGAAAAACTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGAGTTGTTAAAGGCATTCAATTTTTGCACACTGGGATAGTTCCTGGATTGTATTCAAATAATCTGAAGATAACAGATATTCTACTGGGTAGCAATCTCAATGTCAAAATATGCAGCTATAATCTTCCTCTAATGACTGAAAATAAGATAATGGTAGGAAATGGAACTTTTTCCCCTGTGGTTAAAGGAAATGTTCAAGCAAGGACAAAGGACGGTGATAAGAATGATGTCTATGATTTTGGTGTAATCTTACTTGAAATCATTCTTGGACGCACAATCCTGTTCCATAATGAAGTTGGGACACTAAAAGATCTCTTACAAGTAAGCCTAGCAACTGATGAAATAGCTAGAAGGAGCATTGTTGATCCAGTAATTCACAAGCAATGTTCAGATGAATCAATGAAAAGAGTGATGGAGTTATGTGTGAGATGTGTCTCAGAAAATCCTACTGATAGGCCTTCTGTGGAAGATGCTCTCTGGAATCTGCAGTTTGCAGTTCAAGTTCAGAATTCATGGGGAAGAGACTCCCTTGATACAAGAGAATCACCTTCTTCACCTGCCCAAGAAACACAAGCTTCCTAA	2541	0.4022	MAKQLRHFHHFFFFVLLFFLAIHPTHQLQHSQSYALLKFQKLLGYPSALSSLRTTRDFCNIEATNYLTIVCYEDNVTQLHVVSDNGVSPLPQDFSSVSLFATLGTLSSLKVLSLVSMGLWGPIPESISQLFSLEILNISSNHFSGAIPTQLSLLKNLQSLVIDDNDFTGEIPMWVGSLQGLAVLSMRRNFLSGSVPTSVKDLQTLRVLDLSNNHFHGELPGLSNLKNLQILNLENNTLGPHFPSLPTKLVSLVLRNNSFRFGIPSNLSSYYQLQKLDLSLNGFVGPFPPSLLSLPSIKYLDVSANKFTGMLFSNYTCSSDILFVNLSSNLLKGELPSCLKPDNKVVALYARNCFSNGGQDQHPSTFCQTEALAVNVMPHEQKQRKRTTGKAVLVSSMGGIVGGAVVFGVVFLVIVRVNKKGSVKAPEGSTLEQVISQMDDEDDEVKKPRTVLSVMENIISLVPKPNKEFVKTFARSMMENVVNRVHHKHVRPARSIVEHVSSVNTAKLLTDARYISQTMKMGASLPSYKTFALDELKEATNNFDVSCFISEGARGQIYKGSLSDGTQIAIRSLKMKKRHGPQNYMHHIELISKLRHPHLVSALGHCFEGNHEDPSVNSIYLIFEFAPYRSLRGCISGSSGEKLSWAQRIAAAIGVVKGIQFLHTGIVPGLYSNNLKITDILLGSNLNVKICSYNLPLMTENKIMVGNGTFSPVVKGNVQARTKDGDKNDVYDFGVILLEIILGRTILFHNEVGTLKDLLQVSLATDEIARRSIVDPVIHKQCSDESMKRVMELCVRCVSENPTDRPSVEDALWNLQFAVQVQNSWGRDSLDTRESPSSPAQETQAS	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g0331	846	Pfam	Leucine rich repeat	156	215	IPR001611	GO:0005515
	Lele30g0331	846	Gene3D	Transferase(Phosphotransferase) domain 1	628	833	-	-
	Lele30g0331	846	ProSiteProfiles	Leucine-rich repeat profile.	204	226	IPR001611	GO:0005515
	Lele30g0331	846	Pfam	Protein tyrosine and serine/threonine kinase	549	810	IPR001245	GO:0004672\|GO:0006468
	Lele30g0331	846	MobiDBLite	consensus disorder prediction	827	846	-	-
	Lele30g0331	846	Gene3D	Ribonuclease Inhibitor	29	244	IPR032675	-
	Lele30g0331	846	ProSiteProfiles	Protein kinase domain profile.	543	817	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele30g0331	846	SUPERFAMILY	Protein kinase-like (PK-like)	522	817	IPR011009	-
	Lele30g0331	846	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	517	625	-	-
	Lele30g0331	846	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	627	831	-	-
	Lele30g0331	846	FunFam	Leucine-rich repeat receptor protein kinase EMS1	147	245	-	-
	Lele30g0331	846	PANTHER	UNNAMED PRODUCT	101	745	-	-
	Lele30g0331	846	SUPERFAMILY	L domain-like	59	354	-	-
	Lele30g0331	846	Gene3D	Ribonuclease Inhibitor	245	369	IPR032675	-
	Lele30g0331	846	FunFam	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770	247	372	-	-
	Lele30g0331	846	Gene3D	Phosphorylase Kinase; domain 1	503	624	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g0331	Lele-ChrLele30	7925057	7930596	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele30g0331	494	829	Miscellaneous Gene Families	AT3G03770	57.101	3.30e-124	391

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Lele30g0331		PK_Tyr_Ser-Thr	4.8e-20	CL0016