Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele30g0325 | ATGCCACATTACGCGCTTCAGATCAGAAAATTTTCTGATGGCCTTAGATCATATGGTGTAAATGTTCCATTTCTGCATCATCATAACTTGAGCATTCACAACAATTACTCAATTGTGACACGAAATACTGTAAGAGACACATTGTGCTTGTTCCAAGCTCTTAGTAGAAAATTGCTGCAAGAAATAGAAGCAAAGTCAAAAGGCCAAGCAAAAATTCGCAAGAGGGTTGATTCAGAGGTAGCAAAGATCCTCAGGTATGAAGGGAAATATGTAAATGCAGGCAAGAAGATCTTCGGTTCTGTCCCTGGGTTTGAAGTAGGTGATGAATTTGATTATAGGGTGGAGCTTAATATTGTTGGTCTTCATCGCCAAACACAAGCTGGCATAGATTTTGCGAAGGTCAATGGTGAGCACCTTGCAACTAGTATTGTTTCATTAGGGGGATATGATGATGAGTTGGATACTTTGGGTGTTTTGATTTATTCAGGGCATGGGGGGAATGTGATGAACAATAAGAAAGACCCTGAAGATTAG | 534 | 0.3989 | MPHYALQIRKFSDGLRSYGVNVPFLHHHNLSIHNNYSIVTRNTVRDTLCLFQALSRKLLQEIEAKSKGQAKIRKRVDSEVAKILRYEGKYVNAGKKIFGSVPGFEVGDEFDYRVELNIVGLHRQTQAGIDFAKVNGEHLATSIVSLGGYDDELDTLGVLIYSGHGGNVMNNKKDPED | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele30g0325 | 177 | Pfam | SAD/SRA domain | 98 | 172 | IPR003105 | - | |
| Lele30g0325 | 177 | Gene3D | - | 80 | 177 | IPR036987 | - | |
| Lele30g0325 | 177 | ProSiteProfiles | YDG domain profile. | 99 | 177 | IPR003105 | - | |
| Lele30g0325 | 177 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 40 | 175 | - | - | |
| Lele30g0325 | 177 | SUPERFAMILY | PUA domain-like | 91 | 174 | IPR015947 | - | |
| Lele30g0325 | 177 | SMART | G9a_1 | 94 | 177 | IPR003105 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele30g0325 | Lele-ChrLele30 | 7766675 | 7768661 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele30g0325 | 44 | 173 | Su(var)3-9 homologs | AT1G73100 | 41.791 | 1.05e-20 | 86.7 |