Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0314 ATGGCTGAAGAACCTCAGAGGATAGTGGTGATAACAGATGCATCAAAAGATGTTTGTGCAAATGCCATAAAGAAGGCCATGACACATGTATGCCCTCAACCAGGAGATGTGCTTACCCTCATAGGATATCTTGATCACTTCCTTCATCCCCTGGGATACATGGTCAGTGTTGGTACCACTCGATTAATTTCAACTAATGACAAAATTGTTAAAGAGGAATTTGCCAGAAAAAGGGAGGACTATCACGGGAGTAAACCAATCATGAAGCTCAAAGAGTATTGTGAAACAATGAAGATGGAATTCCAAATTGATGGTTTTGCACGCCCTTTCATAGAGGTCGCTTCTTATGCTGCCAGAAGTTTAGGGGCAACATGGTTGATTGTCGATAGACATGTGAACAAATACGAGAGGCCATTTGACAAGCTACCTTGTGGTTTGTATAGAATAAGAAGTGACAAATCCATTGAGAAGCTGAGAGATCCAGAAGTAATAACAAAGTGCTCCAAATCAGTTGCTGCAAGGAAAGATACTAATATGATAGCAGGAAACCCATCCGAAGATGTTTCTTCCCAGAGGCATAGATCATCAGCAAGTGAACATTTCGCATCAACTGGAACATCAAGTTCAAGCCTGCATGAGTTTATGAAAGACAGGAAGCAAGAAGTTCAAAATATAGAATTTATGAACCCACTCTGTTCTGTTTGTAAAAGTGAACGACCGAAAGTTGGATGGAAGAAAGACTTCAGTTACACAGAACTCTGGAAAGCTACACAGGGATTCTCCCCAAAGAACTTTTTATCAGAGGGTGGCTTTGGATCTGTCTATAAAGCAGAGCTCAATGGAATAACAGTTGCTGTTAAGAAACTTAATAGTGTAAGTTTCCGTGGAGAAAAAGAATTCAATTCTGAAGTCAGTTTACTTAGTAGAGCAAGACATGAGAATGTGGTCATGCTTCTGGGATCCTGCTCAGAAGGAAAGCGTAGGCTTCTTGTTTATGAATATGTCTGCAACGGTTCACTGGACCAACATTTATCTCAACACTCTCGATTCCCTCTTAGTTGGGAAGAGAGAATCAAAGTTGCTATTGGAGTTGCAAAGGGCCTGCTATATTTGCATGAGAATGACATTATACACAAAGATGTGAGACCAAACAATATCCTTATCACACATGATCATCAAGCTCTGGCAAGGCCACTAATAAAACAAAGGAATTTTCCTGATCTTATTGATAGAAGGATCATCAACTCTCTTGACTTTGATCAACTATTTTGGATGATTCGAATAGCAAGAAAATGTCTAACGAGGAATTATCGGAATAGACTAAATATGATGTCAGTAAGTCAACATCAGCTTGCCTTAACTCCTTTTAGTCAATCATATACTTCTATGCATTGGAGAAAAGCTAGAACTTCCACTAGATCAGACAAAAGTAGTTTGCAGAATTGTAAGGTGGTGAATGCTTTGAGTTGCCTAGTCGAATGGAGCACCTGCATCTCATCATCAGACTCTGATGAATCAGAAGGTGAAATCATTGAGAAGAATTTGAATCAGAAGAGTTAG 1560 0.3949 MAEEPQRIVVITDASKDVCANAIKKAMTHVCPQPGDVLTLIGYLDHFLHPLGYMVSVGTTRLISTNDKIVKEEFARKREDYHGSKPIMKLKEYCETMKMEFQIDGFARPFIEVASYAARSLGATWLIVDRHVNKYERPFDKLPCGLYRIRSDKSIEKLRDPEVITKCSKSVAARKDTNMIAGNPSEDVSSQRHRSSASEHFASTGTSSSSLHEFMKDRKQEVQNIEFMNPLCSVCKSERPKVGWKKDFSYTELWKATQGFSPKNFLSEGGFGSVYKAELNGITVAVKKLNSVSFRGEKEFNSEVSLLSRARHENVVMLLGSCSEGKRRLLVYEYVCNGSLDQHLSQHSRFPLSWEERIKVAIGVAKGLLYLHENDIIHKDVRPNNILITHDHQALARPLIKQRNFPDLIDRRIINSLDFDQLFWMIRIARKCLTRNYRNRLNMMSVSQHQLALTPFSQSYTSMHWRKARTSTRSDKSSLQNCKVVNALSCLVEWSTCISSSDSDESEGEIIEKNLNQKS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0314 519 MobiDBLite consensus disorder prediction 500 519 - -
Lele30g0314 519 FunFam Proline-rich receptor-like protein kinase PERK8 222 334 - -
Lele30g0314 519 Gene3D Transferase(Phosphotransferase) domain 1 336 396 - -
Lele30g0314 519 ProSiteProfiles Protein kinase domain profile. 260 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0314 519 SUPERFAMILY Protein kinase-like (PK-like) 236 449 IPR011009 -
Lele30g0314 519 Gene3D Phosphorylase Kinase; domain 1 233 334 - -
Lele30g0314 519 MobiDBLite consensus disorder prediction 182 211 - -
Lele30g0314 519 Pfam Protein tyrosine and serine/threonine kinase 264 393 IPR001245 GO:0004672|GO:0006468
Lele30g0314 519 ProSitePatterns Tyrosine protein kinases specific active-site signature. 376 388 IPR008266 GO:0004672|GO:0006468
Lele30g0314 519 MobiDBLite consensus disorder prediction 178 211 - -
Lele30g0314 519 PANTHER OS01G0253100 PROTEIN 187 394 IPR045271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0314 Lele-ChrLele30 7099027 7105385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0314 248 394 Trihelix Transcription Factor Family AT1G23540 48.344 1.31e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele30g0314 PK_Tyr_Ser-Thr 7.5e-30 CL0016