Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0313 ATGGCAGAAGAAATTCAGAGGGTAGTGGTGATAGTGGACGCATCAAAAGATGTTCCAGCGAAACCCATAATGAAGGCCCTGGAAAGGACAAGTCCCCAGGCTGGAGATGAGCTTAAACTCATAGTGGTTCTTGAACAGTTCAGCAGCCCCTTGGGATACAAGATCAGGGTCCATGGCAGTCCATTTCTTGCAACACGCCAAAAATATGTTGCCGAGGAGTTAGCTAGAAAAAGGGATGAATTTAAAAAGAGTTCAGAAGTCATGAAAATCTCTGGGTATTGTAAAACAAGAAAGATGGATTTCCACGTTGATGTGGTTGCACACCCTTTCATAGAGGTTGCTTCTGATGCTGCCAAAAGTTATGGAGCAACATGGTTGATCGTTGATAGACGTGTGGACAAAGATAACAAGAAATTGCGGTTACCTTGTGGCGTGTTTAGAATAAAAAGTGACAACACTATTGAAAAGTTGTCGGATCCAGAAGTGACCATAGAGAACTCCAAATCACATTCCTCAAGTCAAGCTATGACAACCATTCCTGGAAACCCAGATAAAGAAATTTCACCCAAGAGGCATAGATCGTCACCAAGTGAACAGTTTACATCAATTGGAACATCAAGTTCAAGCAATCTTCAGTTAATGAATGACAATGAGCAGGTAGAAGCTCAAAATATAGAACAAGAAAAAGAAAGGATATTTTTAATCTCTGGCCACCATGAGCAGCAAAGAGGGGATAATGAAGAGTCTCAGATGGAGACAGAATTTACAAACCCACTTTGTTCAGTGTGTAAAAATAAACGACCAAAAGTTGGATGGATGAAATACTTCAGTTACACAGAACTCTGGAAAGCTACACAGGGATTCTCCCAAAAGAACTTTCTATCAGAGGGTGGATTTGGAGCTGTCTACAAAGCAGAGCTCAGTGGAATAACTATTGCTGTTAAGAAACTTAAAAATGCAAGTGTCCAAGGAGAGAAAGAATTCAAATCTGAAGTCAAATTACTTAGCAGAGCAAGGCATGAGAATGTGGTCACGCTTATGGGGTCCTGCTCAGAAGGAGAGCATAGACTTCTTGTTTATGAATATGTCTGCAATGGTTCATTGGACCAACATTTATCACAACACTCTCGAATTCCTCTTACTTGGAAAGAGAGGATCAAAGTTGCTATTGGAGTTTCAAAGGGCTTGCAATACTTGCATGAGAACAACATTATACACAGAGATGTGAGACCAAACAATATCCTTCTCACACATGATCGTCAAACTCTGCTGGGAGACTTTGGTTTGGCAAGAAATCAGCATGAAGACTCAATCCAGTCAACAGAGGTTATTGGAACTTTAGGGTATTTGGCACCTGAATATGCAGAATACGGGAAAGTTTCAGCCAAGATAGATGTATATTCTTTTGGGGTGGTTCTGCTAGAACTTATCACAGGAATGAGGACAACAGACAAAAGACTTAAAGGAAAAAGTCTAGTTGGATGGGCAAGGCCACTACTAAAAGACAGGAAATATCATGATCTAATTGATGAAAGGATAACCAATTCTCATGATTTTCATCAACTATTTTGGATGGTTCGAATAACAGAAAAATGTCTAACTAGGGATCCTCAGAAACGACTAAATATGGTTGCAGTAAGTCAGCATCCGCCTTAA 1656 0.4022 MAEEIQRVVVIVDASKDVPAKPIMKALERTSPQAGDELKLIVVLEQFSSPLGYKIRVHGSPFLATRQKYVAEELARKRDEFKKSSEVMKISGYCKTRKMDFHVDVVAHPFIEVASDAAKSYGATWLIVDRRVDKDNKKLRLPCGVFRIKSDNTIEKLSDPEVTIENSKSHSSSQAMTTIPGNPDKEISPKRHRSSPSEQFTSIGTSSSSNLQLMNDNEQVEAQNIEQEKERIFLISGHHEQQRGDNEESQMETEFTNPLCSVCKNKRPKVGWMKYFSYTELWKATQGFSQKNFLSEGGFGAVYKAELSGITIAVKKLKNASVQGEKEFKSEVKLLSRARHENVVTLMGSCSEGEHRLLVYEYVCNGSLDQHLSQHSRIPLTWKERIKVAIGVSKGLQYLHENNIIHRDVRPNNILLTHDRQTLLGDFGLARNQHEDSIQSTEVIGTLGYLAPEYAEYGKVSAKIDVYSFGVVLLELITGMRTTDKRLKGKSLVGWARPLLKDRKYHDLIDERITNSHDFHQLFWMVRITEKCLTRDPQKRLNMVAVSQHPP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0313 551 FunFam Proline-rich receptor-like protein kinase PERK8 250 362 - -
Lele30g0313 551 MobiDBLite consensus disorder prediction 164 181 - -
Lele30g0313 551 ProSiteProfiles Protein kinase domain profile. 288 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0313 551 Gene3D Phosphorylase Kinase; domain 1 260 362 - -
Lele30g0313 551 ProSitePatterns Tyrosine protein kinases specific active-site signature. 404 416 IPR008266 GO:0004672|GO:0006468
Lele30g0313 551 Coils Coil 208 230 - -
Lele30g0313 551 Pfam Protein kinase domain 290 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0313 551 MobiDBLite consensus disorder prediction 194 211 - -
Lele30g0313 551 SMART tyrkin_6 288 550 IPR020635 GO:0004713|GO:0006468
Lele30g0313 551 MobiDBLite consensus disorder prediction 160 211 - -
Lele30g0313 551 PANTHER OS01G0253100 PROTEIN 176 547 IPR045271 -
Lele30g0313 551 SUPERFAMILY Protein kinase-like (PK-like) 271 550 IPR011009 -
Lele30g0313 551 Gene3D Transferase(Phosphotransferase) domain 1 363 550 - -
Lele30g0313 551 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 363 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0313 Lele-ChrLele30 7064033 7068356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0313 275 546 Trihelix Transcription Factor Family AT5G38560 47.368 6.98e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele30g0313 PK_Tyr_Ser-Thr 6.3e-51 CL0016