Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0312 ATGCCACTGAAGATCAGTGGACGGAGCACTGGTGGAGTTATCTTGAAGAAAGGGCCATGGACATCTGCTAAAGGTACTATTTTAGTGGACTATGTCAGGAAGAATGGAGAGGGCTACTGGAATGCTATTCAGAAGTATTCAGGCCTATCTCGCTGTGGCAAAAGCTGCCGGCTGCGATGGGCGAATCACCTGAGACCAAATCTAAAGAAAGGTGCATTTACTGCGGAAGAAGAGCGGCTAATTGCTGAACTGCATGGAAGGGAAACAAATGGGCACTCACCGCTGCATATTCTGCTGGAAGGTTATGGCTCATCTCCAAATCGTAATATTTTGCCACCAATGCTACCTCACCATAAGCACCTTGGAGGGTCGACAATGCCATTCCTTGGTGAAGATATGATTGCACGATCATTTGGAACGCATTCTCCTCTTGATCATGGTCCCTCCTCACAGAGTTCACTGTGTTACAGCCATTCACTTTCAAATGGCTATTCATCTACTTCTAAGCCAGTTTCCCATACAGAATGGGATGACCACATTGACCCTGTTTCTCCATTTGGTGCAACATCAATCGTAAATGAATGCCCTGCTATTTGTGCTTATAAATCCTTATTGGATGAACTACCGCCTGTACAGGCCTCAAGGGGGTACATGGTGAAATTACAATCAGTTGACCAGGATTGGATCCCCAACAGTGAAGATCAAACCATATCCATGTTGGATATTGCTGAGCCAGATGGCTTCCTCGCTTCATACTCGTTTGACCGTGGTTCTGATGCTGTAACAACCGAGTAA 795 0.4591 MPLKISGRSTGGVILKKGPWTSAKGTILVDYVRKNGEGYWNAIQKYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHGRETNGHSPLHILLEGYGSSPNRNILPPMLPHHKHLGGSTMPFLGEDMIARSFGTHSPLDHGPSSQSSLCYSHSLSNGYSSTSKPVSHTEWDDHIDPVSPFGATSIVNECPAICAYKSLLDELPPVQASRGYMVKLQSVDQDWIPNSEDQTISMLDIAEPDGFLASYSFDRGSDAVTTE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0312 264 CDD SANT 19 64 IPR001005 -
Lele30g0312 264 SMART sant 16 66 IPR001005 -
Lele30g0312 264 Gene3D - 16 69 - -
Lele30g0312 264 ProSiteProfiles Myb-like domain profile. 15 64 IPR001005 -
Lele30g0312 264 FunFam MYB-related transcription factor 16 69 - -
Lele30g0312 264 Pfam Myb-like DNA-binding domain 20 79 - -
Lele30g0312 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Lele30g0312 264 SUPERFAMILY Homeodomain-like 18 87 IPR009057 -
Lele30g0312 264 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0312 Lele-ChrLele30 7039457 7045427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0312 9 134 MYB Transcription Factor Family AT5G55020 54.762 1.93e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele30g0312 Myb_DNA-bind_6 6.1e-10 CL0123