Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0309 ATGCAAGGAGGGTCAGGTCAAAACTCAAATATTCCTTCAGGATCCATAGATAAGACAAGGGTTTTGGATGTTAAACCTCTGCGTACTTTAGAACCTGTGTTTCCAAATTCAGCTCAGGCTACTAGCGTCAATGGTGCTTGTCCCACTGGGTTTTATTCCTTTTTCCCATTTGGTGCATCTCAAGAACCTCAAGAGTCACCTCCTAAGGTTCCCATGCCAACTCCAATACGGTCTTTTAGAAGCACTTACACTGGAGAAGCAACCCCGAATGAGTTTCCTGGAGCTTCCAATGGGGAAAATTCTGATAGCCAAGGTTGTGTGGCACCAAACAGATCCAAATCCTCCAAAAAGAAGCCTAAGATAAGTCAAGATTTGCAAATTGATGTGAGTTCTTTATACGGCATTGGCAAAAATGAACGTGAAGATGGTAATCGGGAATTGGTTAATCTTTCACTCATGACATTTGATGCGCTTAGGAGAAGGATCAGCCAGCTTGAAGATTCCAAGGAATTGACACTAGGATTGAGCAAGCGAGCGGATATGAGAGCTGGAAACATTTTGATGAGTGCTGGGATTCGAACAAACATGAGGAAAAGAATAGGAGCTGTGCCTGGGGTTGAGGTTGGGGACATTTTCTTTTTTCGACTAGAATTATGTATTGTGGGTCTGCATAGTCAGTCTATGGGTGGGATCGACTACACAAATATGGGTGGTAAAAATGAGTTTGATCCTTTGGCTTTAGCTATTGTTTCATCTGGAAAATATAATGACAATGCAGAGGATAGTGATATTTTGATCTATAGTGGTCAGGGTGGGGATAAGGGGGATGATCAAAAGCTAGAAAGGGGTAATCTTGCTTTGGATAGAAGCTTGCGACAGAAGAATGATGTCAGAGTAATACGAGGCATGAAAGATCAAATGAATTCAACTTCAAAGGTCTATATCTATGATGGGTTGTATAAAATCCAGGATTCATGGATAGAAAAAGGGAAATATGGTGGTGGTGTATTCAAGTACAAGTTGGTGAGAGTACCAGGACAACCCAAAGCCTTTGCTGCTTGGAAATTGATTGAAAAGTGGAAAGCTGGCATCGCCTCTAGGACTGGGCTCATTCTTGCAGACCTCTCCTCGGGAGCTGAGAAAATTCCTGTGTCGCTTGTCAATGATGTTGATGATGAGAAAGCACCTAGTTATTTCACTTATCTCCATTCTCTTAGATATTCAAAATCCTTCATTGTTTCACAGCCTTATGATTGCTGCAATTGTCAAAAAGATTGCACTCCTGGTGATTTGAACTGCTCTTGCATTCGTAGAAACGAAGGTGATTTTCCATATATAGGGAATGGCATTTTAGTGAGTCGGAAGAAATTGGTTCATGAATGTGGCCCTTCATGTCAATGTTTTCCTAACTGCAAAAATCGCATATCCCAAACTGGTTTAAAGTACCGTATGGAAGTGTTCAAAACAAAGTATAGAGGATGGGGCCTTCGATCATTGGATCCTATTCGTGCAGGTACCTTTATTTGTGAGTATGCAGGAGAAGTTATTGACAGGGCCAAGGTAAGTTGGAATGGCAATAATGATGAGTATGTTTTTGACACGACTCGAATTTATCACCCATTGAAGTGGAACTATGAACCTAAGTTACTTGAAGAGGCTGGTTCAAATGATTCTAGTGAGGATTATAATATTCCATCTCCTCTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTCTTTTGGCAGCCAGTTTTATATGAAGAAAACAACCAACCTGTTGTCCATATTTCCTTTTTGGCCCTAAGACACATTCCTCCACTTACAGAATTGACATATGATTATGGGATTGCCCGTTCTGATTCTACTGTGGGTCACAGTGCACCTAGATGGAAAAAGGAATGCTTATGTGGATCATTAAAATGTCGGGGTTCTTTTGGTTGA 1974 0.4093 MQGGSGQNSNIPSGSIDKTRVLDVKPLRTLEPVFPNSAQATSVNGACPTGFYSFFPFGASQEPQESPPKVPMPTPIRSFRSTYTGEATPNEFPGASNGENSDSQGCVAPNRSKSSKKKPKISQDLQIDVSSLYGIGKNEREDGNRELVNLSLMTFDALRRRISQLEDSKELTLGLSKRADMRAGNILMSAGIRTNMRKRIGAVPGVEVGDIFFFRLELCIVGLHSQSMGGIDYTNMGGKNEFDPLALAIVSSGKYNDNAEDSDILIYSGQGGDKGDDQKLERGNLALDRSLRQKNDVRVIRGMKDQMNSTSKVYIYDGLYKIQDSWIEKGKYGGGVFKYKLVRVPGQPKAFAAWKLIEKWKAGIASRTGLILADLSSGAEKIPVSLVNDVDDEKAPSYFTYLHSLRYSKSFIVSQPYDCCNCQKDCTPGDLNCSCIRRNEGDFPYIGNGILVSRKKLVHECGPSCQCFPNCKNRISQTGLKYRMEVFKTKYRGWGLRSLDPIRAGTFICEYAGEVIDRAKVSWNGNNDEYVFDTTRIYHPLKWNYEPKLLEEAGSNDSSEDYNIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQPVVHISFLALRHIPPLTELTYDYGIARSDSTVGHSAPRWKKECLCGSLKCRGSFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0309 657 SUPERFAMILY PUA domain-like 183 365 IPR015947 -
Lele30g0309 657 MobiDBLite consensus disorder prediction 77 111 - -
Lele30g0309 657 Pfam SET domain 493 626 IPR001214 GO:0005515
Lele30g0309 657 MobiDBLite consensus disorder prediction 1 22 - -
Lele30g0309 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 62 649 - -
Lele30g0309 657 SMART G9a_1 196 347 IPR003105 -
Lele30g0309 657 SMART set_7 482 632 IPR001214 GO:0005515
Lele30g0309 657 Pfam SAD/SRA domain 200 347 IPR003105 -
Lele30g0309 657 Gene3D SET domain 366 656 IPR046341 -
Lele30g0309 657 ProSiteProfiles SET domain profile. 482 626 IPR001214 GO:0005515
Lele30g0309 657 SMART preset_2 372 466 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0309 657 Gene3D - 184 365 IPR036987 -
Lele30g0309 657 SUPERFAMILY SET domain 382 654 IPR046341 -
Lele30g0309 657 ProSiteProfiles Post-SET domain profile. 641 657 IPR003616 -
Lele30g0309 657 MobiDBLite consensus disorder prediction 1 16 - -
Lele30g0309 657 Pfam Pre-SET motif 376 474 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0309 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 184 362 - -
Lele30g0309 657 ProSiteProfiles Pre-SET domain profile. 418 479 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele30g0309 657 MobiDBLite consensus disorder prediction 58 123 - -
Lele30g0309 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 657 IPR025794 GO:0016571
Lele30g0309 657 ProSiteProfiles YDG domain profile. 201 343 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0309 Lele-ChrLele30 6996103 6998076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0309 1 657 Su(var)3-9 homologs AT1G73100 52.471 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele30g0309 SAD_SRA 2.7e-45 CL0178