Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0287 ATGATGGAATCATCAAAACAAATTATTCCCACTCCTGGATTTGTGATGATGATCTTCTTCACAATCGTCATGATCAATTTCATCAGAACAAGTACTTCTCTAGCACCAAATTACGTTGGAGATGATTGCCATAACAAAACCCCACAAGCTCTTAGTGCTTCATACAAAGCCAATCTTAACCAGCTGCTCTCATGGCTCTCCACCGACTCCTCCACAAGCAAAGGCTACAATCATGCCACCGTTGGCACCAACGCTACCAACGCCGTCATCTACGGCCTCTATGACTGCCGTGGTGATGACCCCGGATACCTCTGTCAGTTTTGTGTCTCAACTGCCACCAGAGAGCTTCTCCAACGCTGTCCCAATCAACCTTCTGCTGCAATATGGTACAGCTATTGCATCCTCAGATACTCAAACGAGAACTTCTTTGGGAAGGTGACAATGAGCCCGTTGTGGTCCATGGAAGGAGCGAAGAAGGTGTTGGATCCGACGGAGTGGAAGAAGGCGGAAAGTTACATAAGGAGTCTGATCAAACAAGCGACAACGGAGGAGACGAAGGAATTAAGTGCATGGGGAGGGTTTGATTTGGGAGGTGGAAGAAGAAGGTACGCTTTGGTACAGTGTAGTAGAGACCTTGACAGAAAGAGTTGCAAGCAATGTTTGGAGGCTACGATGAATAACGTTACTCAATGTTGTGAGCAGAAACAAGGATGGCAACTTGGGACGCCAAGTTGTATGATCAAATACAACGATTACATGTTTTATCAGCCACCCTCTTCTGATCATAATCCTACGACAGGCAACGATGGAGATGGCAAGTCCAAATCCTTGATCATAAGCATAAGTTTATTAGTGGCTTTGGTAATACTAAGTTTTTCTGTCTACCTATGGCGAAGAAGGAAGTATAGAAAAGGTGAACCACCATCGGAAGGCGCTCCTATATTTTATGACTTCACTCGAAGAGAGAGATCATTAAACACAGACCTTCCCACAATCCCATTACATGTGATTCAACAGAGCACTCATTACTTTTCAGAAGATTCTAAATTAGGAGAAGGTGGATTTGGTACTGTTTATAAGGGAACATTGCTAGATGGGAAGGAAATTGCCGTTAAAAGACTCGCACAAGCATCAAGTCAAGGTTCAAAGGAGTTAAAAAATGAAGTCATATTCATAGCGAAATTGCAACATAGAAACCTTGTCAAACTCTTGGGTTGCTGTATTGAGAAAAACGAGAAGCTACTTATATATGAGTATATGCCAAATTCTAGTCTTGACTTCCACCTTTTCAATGAAGAAAATAGAAAGAAACTACATTGGAATCAAAGACTAAATATTATTAATGGGATTGCAAAAGGACTTTTGTATCTTCATGAAGATTCTCGACTTATAGTAGTGCATAGAGATTTGAAGGCTAGCAATGTCCTTTTAGACAATGAGATGAATCCTAAAATATCAGATTTTGGATTGGCAAGGACTTTTGAAGGAGCTCGAAATGAGGGAAATACAAAACGAATAATGGGTACTTATGGTTATATGGCTCCGGAATATGCTATGGAAGGATCATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATATGTGGAAAAAAGATTTGCAGTTTCTATCTCTCTGAACATGGCCAAAGTCTTCTGATTTATACTTGGAATTTGTGGTGCAAGGGAAAATGTTTAGAATTGTTGGACCCAATGCTAAAAGATTATTATATAGCAAATGAAGTTGTGAAGTGCATACATATTGGCTTGCTTTGTGTTCAAGAAGATCCAGATGATAGACCAACTATGTCTACTGTTGTAGTCATGCTTGCAAGTGACACAATGACATTACCAACACCTAATCCTCCTGCATTTTCTAGAAGAAAGTCCATGGAAGATCAGTCATCTACTTCTAAAACTTACGACGCTTCTGTTAATGAGATAACAGTGTCTCACATCACACCCAGATGA 1986 0.4038 MMESSKQIIPTPGFVMMIFFTIVMINFIRTSTSLAPNYVGDDCHNKTPQALSASYKANLNQLLSWLSTDSSTSKGYNHATVGTNATNAVIYGLYDCRGDDPGYLCQFCVSTATRELLQRCPNQPSAAIWYSYCILRYSNENFFGKVTMSPLWSMEGAKKVLDPTEWKKAESYIRSLIKQATTEETKELSAWGGFDLGGGRRRYALVQCSRDLDRKSCKQCLEATMNNVTQCCEQKQGWQLGTPSCMIKYNDYMFYQPPSSDHNPTTGNDGDGKSKSLIISISLLVALVILSFSVYLWRRRKYRKGEPPSEGAPIFYDFTRRERSLNTDLPTIPLHVIQQSTHYFSEDSKLGEGGFGTVYKGTLLDGKEIAVKRLAQASSQGSKELKNEVIFIAKLQHRNLVKLLGCCIEKNEKLLIYEYMPNSSLDFHLFNEENRKKLHWNQRLNIINGIAKGLLYLHEDSRLIVVHRDLKASNVLLDNEMNPKISDFGLARTFEGARNEGNTKRIMGTYGYMAPEYAMEGSFSVKSDVFSFGVLLLEIICGKKICSFYLSEHGQSLLIYTWNLWCKGKCLELLDPMLKDYYIANEVVKCIHIGLLCVQEDPDDRPTMSTVVVMLASDTMTLPTPNPPAFSRRKSMEDQSSTSKTYDASVNEITVSHITPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0287 661 SUPERFAMILY Protein kinase-like (PK-like) 329 641 IPR011009 -
Lele30g0287 661 FunFam Cysteine-rich receptor-like protein kinase 28 39 141 - -
Lele30g0287 661 CDD STKc_IRAK 350 615 - -
Lele30g0287 661 Gene3D Phosphorylase Kinase; domain 1 317 419 - -
Lele30g0287 661 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Lele30g0287 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 657 - -
Lele30g0287 661 SMART serkin_6 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0287 661 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Lele30g0287 661 MobiDBLite consensus disorder prediction 623 646 - -
Lele30g0287 661 Pfam Domain of unknown function (DUF3403) 617 661 IPR021820 GO:0004674
Lele30g0287 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Lele30g0287 661 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Lele30g0287 661 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0287 661 Gene3D - 160 254 IPR038408 -
Lele30g0287 661 Gene3D - 37 142 IPR038408 -
Lele30g0287 661 Pfam Salt stress response/antifungal 43 139 IPR002902 -
Lele30g0287 661 Pfam Salt stress response/antifungal 169 252 IPR002902 -
Lele30g0287 661 FunFam Liguleless narrow1 420 623 - -
Lele30g0287 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 315 419 - -
Lele30g0287 661 ProSiteProfiles Gnk2-homologous domain profile. 148 254 IPR002902 -
Lele30g0287 661 Pfam Protein tyrosine and serine/threonine kinase 347 614 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0287 Lele-ChrLele30 6130432 6136780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0287 19 661 Receptor kinase-like Gene Family AT4G05200 39.439 1.82e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele30g0287 PK_Tyr_Ser-Thr 4.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0287 30 6130432 6136780 Lele31g0337 31 6975834 6976655 hybridization