Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0251 ATGAAAGTCCCCTGCTGTTCGGTTTGCCAAACGCGGTATAACGAGGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGGCATGGGTTTTGCAGAGAGTGTCTCTCAAGAATGTTCTCGGCTTCTCCAGAAACGACGCTAGCTTGTCCGAGGTGTCGCCATGTGTCAATCGTCGGGAACTCTGTGCAGGCTCTGCGCAAGAACTACGCCGTTCTGGCCCTTATTCACTCGGCTTCGAATGCTTCGGGTTCGAATTTCGATTGTGACTTCACAGATGATGATGAAGAAGGGGGTGATGGGGGTGAAGAAGATGGAGACAATGATGACGACTCGGTCATGCGCCGTCGGTGTAGCGGCGGTTCCCAAACATCAAGCTCTGGCGGCTGTGGACCGGTTATAGAGGTTGGAGTGCACCAAGAATTGAAATTTCTGCGTCGGCTAGGAGAGGGGAGGAGGGCTGGCATGGAAATGTGGACAGCGATAATTGGTGGTGGTGGTGGTGGTGGAAATGGACGATGCCGACATCAAGTGGTGGTGAAGAAGGTTACGATAATGGAGGAGATGGATTTGGATTGGATGCAGGGGCAGCTTGAGAATCTGCGTCGTGCTTCGATGTGGTGTAGGAATATATGTACATTTCATGGGGCAATGAGGATGGAGGAGAGTTTGTGTCTTGTGATGGACCGGTGTTATGGATCAGTTCAGTCGGAGATGCAGCGCAACGAGGGCAGACTTACTTTGGATCAAGTCTTAAGCCCACATTACACAGCTCCAGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCTTGGTCTGGTTTAAGTGCAGAAGAAATCTATAGAGCAGTTGTCAAGGGAAAGAAACTGCCACCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAACCAGCCAAAAGGCCTAGTTTTAATGCAATGTTAGCAATATTTCTTCGTCATTTGCAGGAAATACCCCGCAGCCCTCCTGCAAGCCCTGATAATGACTTTTTTCAACCATCTGTGTCAAATGCGGTAGAGCCTTCCCCACTACCTGAGCCAGAAGTTCCACGAGAAAATCCGAACCGTCTTCATCGACTTGTGTCTGAAGGGGATGTTAGAGGTGTTAGAGATCTTCTTACAAAGGCTGCATCTGAAAATAGTAGCAACTACCTATCTTCTTTATTGGAAGCTCAAAATGCTGATGGGCAAACTGCTCTTCATCTAGCTTGTAGATGGGGTAGTGCAGAACTTGTTGAAGCTATTTTGGAGTACAGAGAGGCAAATGCAGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGATCTCCAGAATGTGTCCGTAGTCTTATAAAAAGAAATGCTAATGTAAGGTCTCGGTTGAGAGATGGCTTTGGCCCTTCTGTTGCCCATGTTTGTGCTTATCATGGACAGCCAGATTGCATGCGAGAATTACTGTTGGCTGGAGCGGATCCTAATGCAGTGGATGATGAAGGAGAAACTGTACTGCATAGAGCAGTTTCCAAGAAGTACACAGACTGTGCTATTGTGATATTGGAAAATGGAGGCTGCAGATCAATGGGCATATTAAATTCGAAGAATCTGACACCACTGCACTTGTCTGTGGCCACATGGAATGTGGCTGTTGTAAAAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGATGAGGCAATTGACATTCCAAACCCTATTGGCACTGCACTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAATTGTGATGTTCCTTGATGCTAAAGAAAATAAAGGGGGTCAAGACGTTATAACTGCATCTGTTTTAAGGGGCTAA 1977 0.4704 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPETTLACPRCRHVSIVGNSVQALRKNYAVLALIHSASNASGSNFDCDFTDDDEEGGDGGEEDGDNDDDSVMRRRCSGGSQTSSSGGCGPVIEVGVHQELKFLRRLGEGRRAGMEMWTAIIGGGGGGGNGRCRHQVVVKKVTIMEEMDLDWMQGQLENLRRASMWCRNICTFHGAMRMEESLCLVMDRCYGSVQSEMQRNEGRLTLDQVLSPHYTAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWSGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPAKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFFQPSVSNAVEPSPLPEPEVPRENPNRLHRLVSEGDVRGVRDLLTKAASENSSNYLSSLLEAQNADGQTALHLACRWGSAELVEAILEYREANADVLDKDGDPPLVFALAAGSPECVRSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVSKKYTDCAIVILENGGCRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATSDEIDEAIDIPNPIGTALCMAAASKKDHEIVMFLDAKENKGGQDVITASVLRG 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0251 658 MobiDBLite consensus disorder prediction 370 401 - -
Lele30g0251 658 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lele30g0251 658 FunFam E3 ubiquitin-protein ligase KEG 383 613 - -
Lele30g0251 658 ProSiteProfiles Ankyrin repeat profile. 443 476 IPR002110 GO:0005515
Lele30g0251 658 Pfam Ankyrin repeats (3 copies) 424 505 IPR002110 GO:0005515
Lele30g0251 658 Gene3D Transferase(Phosphotransferase) domain 1 212 376 - -
Lele30g0251 658 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lele30g0251 658 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lele30g0251 658 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 85 IPR013083 -
Lele30g0251 658 ProSiteProfiles Protein kinase domain profile. 1 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g0251 658 SUPERFAMILY Protein kinase-like (PK-like) 171 369 IPR011009 -
Lele30g0251 658 ProSiteProfiles Ankyrin repeat region circular profile. 443 465 - -
Lele30g0251 658 Pfam Ankyrin repeats (many copies) 515 564 IPR002110 GO:0005515
Lele30g0251 658 Pfam Protein tyrosine and serine/threonine kinase 252 356 IPR001245 GO:0004672|GO:0006468
Lele30g0251 658 MobiDBLite consensus disorder prediction 85 129 - -
Lele30g0251 658 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 477 506 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 400 429 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 580 611 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 545 576 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 443 473 IPR002110 GO:0005515
Lele30g0251 658 SMART ANK_2a 512 541 IPR002110 GO:0005515
Lele30g0251 658 Gene3D - 512 655 IPR036770 -
Lele30g0251 658 Gene3D - 398 511 IPR036770 -
Lele30g0251 658 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 249 648 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lele30g0251 658 SMART ring_2 6 51 IPR001841 -
Lele30g0251 658 ProSiteProfiles Ankyrin repeat profile. 512 544 IPR002110 GO:0005515
Lele30g0251 658 SUPERFAMILY Ankyrin repeat 405 639 IPR036770 -
Lele30g0251 658 MobiDBLite consensus disorder prediction 87 106 - -
Lele30g0251 658 SUPERFAMILY RING/U-box 5 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0251 Lele-ChrLele30 3170327 3175206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0251 399 589 Miscellaneous Gene Families AT5G02620 26.522 3.36e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele30g0251 PK_Tyr_Ser-Thr 1.9e-12 CL0016