Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0220 ATGAAGATGATGGTGGCATTGCAAATAACGAAAGGAAGAGCCTCCTCCATTGTTGATGTTGCTTTTTCTTCTTCTCCTTCTTCTCATGATGATGATGTGATTGGAACTCTTGATCCCTCCTCCATGTACTTAAAAAATTGGACTGAGATTGATTATATAAACCCAATCATCATCAACCCCAACAATGCCGAACAACATGAGGATGAAAAGGCTAGGGCTCTATTCTCTATTTGTGAAGATGATGACGGCACTGCAAATAACAATAAGGATAAACCTTCCCCTATTACTGATATTGCTTCTACTTCTTCTCATGTTGTTGTCATTGTTGTTGTTTTGTTGTTGCATATAGTCAATTCAGTGCAACGGTTTCTCAGAACAACAGGTGAGGCTAGGGTCGAAACTACAGCAGCCGCTATGGTTCTGAAGACGGAGTTATGTCGTTTTAGTGGGGGAAAGATCTACCCTGGGAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGGTCTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGTCGCGCCACCAAAAAGCCTTACTCTAGGTCAATTGTTGGCGCTACTTTGGAAGTTATCCAGAAGAAGAGAACTGAGAAACCAGAGGTTCGAGATGCTGCTAGAGAAGCCGCTCTCCGTGAGATTAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTTACGGCGAAGGCACAAAAAGCACAAGGAAAAGGAAACGTTCCCAAGGGTGCTGTCCCTAAAGGTCCTAAGCTTGGTGGAGGTGGCGGCAAGCGCTGA 909 0.4444 MKMMVALQITKGRASSIVDVAFSSSPSSHDDDVIGTLDPSSMYLKNWTEIDYINPIIINPNNAEQHEDEKARALFSICEDDDGTANNNKDKPSPITDIASTSSHVVVIVVVLLLHIVNSVQRFLRTTGEARVETTAAAMVLKTELCRFSGGKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKAQKAQGKGNVPKGAVPKGPKLGGGGGKR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0220 302 SMART 4TRASH 146 184 IPR011017 -
Lele30g0220 302 MobiDBLite consensus disorder prediction 256 274 - -
Lele30g0220 302 CDD Ribosomal_L24e_L24 141 194 IPR000988 -
Lele30g0220 302 PANTHER 60S RIBOSOMAL PROTEIN L24 142 294 IPR000988 -
Lele30g0220 302 ProSitePatterns Ribosomal protein L24e signature. 148 165 IPR023442 -
Lele30g0220 302 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 144 196 - -
Lele30g0220 302 Coils Coil 250 281 - -
Lele30g0220 302 Gene3D Ribosomal protein L24e 141 202 IPR038630 -
Lele30g0220 302 Pfam Ribosomal protein L24e 142 205 IPR000988 -
Lele30g0220 302 MobiDBLite consensus disorder prediction 256 302 - -
Lele30g0220 302 FunFam 60S ribosomal protein L24 141 202 - -
Lele30g0220 302 Gene3D - 207 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0220 Lele-ChrLele30 2687243 2695888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0220 139 295 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 4.99e-87 256