Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0217 ATGAAGAAGTCCAAGCCTATTAAGCTTTCTGATATGGAGATTCTCAAAAAGTCATCACCTTCAAAGAAGAGCTTCTCTCAGTCATTAAAGCCGCCTCCTTCTTCTGTTCAAGTTCATCATCATACTGTATCACCATCGTCTTCTCCACAAAAGCAGACACCTTTGATCAGAACAAGTGATGGGTCGCCCAACTACATGAAACCCACAAGCAGTTCGGATGCAAAGAAGGAGCTTTTTCCTGTGAGTCTTCGAAACTCTAAATCTAACTCTAAGTCTAGCTCTGTTTCTACTGCTACTAAGAAAACTGCAAAAACCTTGACAAAATCGTCACCTAGTTTGAAGCTTGTGAGAACCTTAACGAAGACTCCAAGTTTTAAGAAATCCTCTAGAGTTTCTCTTTGTGCTGATATGAATTCTCAGAGAGCTACCTGTTCTTCAATTTTGAAGGACTCAAAGTTCCCTCCTTACCTCATGCTTAATCCTGGTGCTACTGAATCTGAAGGGACTTCAGTTATGAAGGTTTGCCCATATACCTATTGTTCTCTGAATGGTCATCGCCATGCTCTTTTGCCTACATTGAAGAGCTTCTTGTCTGCAAGGAGACGTCTTTTGAAGACCCAGAAGAGTATGAAGATGGAAGCCTTAAGTCCTAGGAAGTTGAAGGTACCCTGTGAGCCAAAGAAGGGATCTGATACTGACATGGATTTCTTCATTGAAATCTATGCCAAGAAAAATGGGGATGAAGAAGAAATCGGACAAATGGGCCCCACCAAAAGGTTTGAGGATGAAGGAAAAACACAAGGGGATGATGATGATGATATGAAGCAAGTTGTTGCAAGCCTGTCTGATGGATCTCCCAAGTCTCAGATAGATTCTGAGGAGGATTATGGAAAGTACTTTAATGATGATGCTGAAATCGAAGCAGTTTCCAAGGGGAGCTTTGTTCAAGAACATGAAGCCGAATTTTCGGATGACAAGCATTTACCTATCTGGTCCAATGAAGAAATAAGCATCGGAAGTTACTGCAGTGAGGTTAGCTATGAGGGGGAAATGTGTGGTTCTGATTCTGTAGCTACTGATATGGAGCGGGATCATGAAGAGGATGATGCTGATTCTTCGGTTCTTACAGAGGATAATGACTCAAAAGTTGAATCATTATCTGAGAGTTCACATGATGTTTCTGTGATGTGGTTGGATGAAATCATTAACATCTACTATGATGACATTGTTGCTGCAGTTTCCCAAGAATCTAATGCCAAAGGAAGTATCTGTTTTGAAGAAAGCTTGGAGACTCGAGAAGGAAATGGTGGAGAAAATGAAATAGTCATGGATGCCACAGTGCACTGTTCAGATTTCACAGAGAAGACATTCGAAGAACTAGAAGAAGCCGGTGAGCAGAATCAGGAAAACAATGATGTTTCAGAGGCTGAGCAAATTTCAGATGAACCGGAAAATAAGTGTCTCCAACAAGATGATTCAAGTATGTCACACGCTGACCAAATTTCAGATGCTTCGCAGGAATGCTACCAATTAAATCAAGTTGAGACTGAGGAAGATGTTGCTGATAATCATTTTAGCCCAGAGGAAGAACCACTTATAGCTGAGACTAATAAAAAAATGGAAGAGGAAGAAGATAATACAGATTTCAAGGAAGAAACAGTTGGGAATTATATTTCTGATTCCTCTGAGGATTGTTGTGAAGCTTCAGAGGATGATAATAGCCGAGGCCAGAAGGCGAGTGAACATTGGAAATGGGCTGGAAGGCGCAAGAGATCAGTTGAAGATGAGGATGAAATGAGGAAGTTCAACCCACGGGATCCGAATTTCCTGCCATTGGTTCCGGATCCAGAAGGAGAGAAGGTTGATCTGAAGCACCAGATGATGGATGAGAGAAAAAATGCAGATGAATGGATGCTTGATTATGCTTTAAGACAAACAGTCACAAAGCTTGCTCCTGCTAGGAAGAGGAAGGTGGCGCTGCTAGTGGAAGCTTTTGAATCGCTTGTAGCTGAGGTGAAGATTGGAGCTGAGAAACTTGCACTATCACCTTTTATCATTTGCAAAGGTAGCTGA 2073 0.4163 MKKSKPIKLSDMEILKKSSPSKKSFSQSLKPPPSSVQVHHHTVSPSSSPQKQTPLIRTSDGSPNYMKPTSSSDAKKELFPVSLRNSKSNSKSSSVSTATKKTAKTLTKSSPSLKLVRTLTKTPSFKKSSRVSLCADMNSQRATCSSILKDSKFPPYLMLNPGATESEGTSVMKVCPYTYCSLNGHRHALLPTLKSFLSARRRLLKTQKSMKMEALSPRKLKVPCEPKKGSDTDMDFFIEIYAKKNGDEEEIGQMGPTKRFEDEGKTQGDDDDDMKQVVASLSDGSPKSQIDSEEDYGKYFNDDAEIEAVSKGSFVQEHEAEFSDDKHLPIWSNEEISIGSYCSEVSYEGEMCGSDSVATDMERDHEEDDADSSVLTEDNDSKVESLSESSHDVSVMWLDEIINIYYDDIVAAVSQESNAKGSICFEESLETREGNGGENEIVMDATVHCSDFTEKTFEELEEAGEQNQENNDVSEAEQISDEPENKCLQQDDSSMSHADQISDASQECYQLNQVETEEDVADNHFSPEEEPLIAETNKKMEEEEDNTDFKEETVGNYISDSSEDCCEASEDDNSRGQKASEHWKWAGRRKRSVEDEDEMRKFNPRDPNFLPLVPDPEGEKVDLKHQMMDERKNADEWMLDYALRQTVTKLAPARKRKVALLVEAFESLVAEVKIGAEKLALSPFIICKGS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0217 690 MobiDBLite consensus disorder prediction 1 109 - -
Lele30g0217 690 Coils Coil 533 553 - -
Lele30g0217 690 Pfam Plant calmodulin-binding domain 579 669 IPR012417 GO:0005516
Lele30g0217 690 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 669 IPR044681 GO:0005516
Lele30g0217 690 MobiDBLite consensus disorder prediction 1 18 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 19 71 - -
Lele30g0217 690 Coils Coil 457 477 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 517 545 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 82 109 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 248 272 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 568 604 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 514 618 - -
Lele30g0217 690 MobiDBLite consensus disorder prediction 460 501 - -
Lele30g0217 690 SMART CaM_binding_2 562 670 IPR012417 GO:0005516
Lele30g0217 690 MobiDBLite consensus disorder prediction 361 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0217 Lele-ChrLele30 2612250 2615082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0217 11 668 Calmodulin-binding Proteins AT2G38800 33.580 9.17e-71 240