Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0215 ATGGCTTTGTTAGATCGCAAAGAGAAACAGGGCAATGAGATGCCAAAAACAGGGAAGGAAGAAGACGAAGACGGCGACATTGACTCATCTGTGCTTTCAGCGCTTCGTCTTCGCAGTAGCCAGGTCTTCTCGGCAGCTCTGAACGCCGCCATTGAACTCAACTTGTTCGACATCATCGCTAAGGAAGGAGGAAGACACGTGTCAGCTTCTGAAGTTGCTTCTCGGCTTCCAAGTTCATCTCAGCACAGAAACTTGGCTTCCAGAATCGATCGTCTCTTGAGGCTTCTCGCGAGTCACTCTCTTCTGAGTTGCAGGGTTCGTGAGAAGGAAGAAGAAGATGGTTCCACTGGGAGTCTCTATGCAATTTCTTCCATTGGGAGGCACTTTGTGAGTGGTTCCTTGGGATTCGTACCAATCTTCTCTCATCCTGCACTCATGAAAGCTTGGCCCAATTTTAAGGATGCAATAATAGACGAAGACAGTGACTTGTTCAAGAAAACTCATGGAATTCCAATGTACCAATACGCAAAAACTGATCCAACATGGAACAAAACTTTCAACAAAGCAATGGCCAATTTTTGCAATATGGAGATGAGAAGGATCCTTGAAATATACAAAGGATTTGAGGGAATATCAACACTCGTTGATGTTGGAGGAGGCACTGGTCAAAACCTCAAAATGATTGTATCTAAGTACCCTTCAATTAAGGGCATCAATTTTGATTTGCCCCAAGTCATTCAAAATGCACCATCCCTTCCAGGGATTGAGCATGTTGGAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATGATATTAAAGGCTGTATGTCACAATTGGTCAGATGAAAAGAGCATTAAAGTGTTGAAGAAATGTCATGAATCATTACCAGAAAAAGGGAAGGTGATAGTGGTGGAGTTTATAATGCCTGAAGAAGAAAATAGGGAAACAGAAGAAGCCAAGTATGTATCAATCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGGAAGAATTTGAATCTCTTTGCAAAAAATCTGGATTTTCAAGCTTCAAAGTCGCTTGTTGTGCTTTTTCTGCTTTAGGAGTCATGGAATTTTGCAAATAA 1122 0.4216 MALLDRKEKQGNEMPKTGKEEDEDGDIDSSVLSALRLRSSQVFSAALNAAIELNLFDIIAKEGGRHVSASEVASRLPSSSQHRNLASRIDRLLRLLASHSLLSCRVREKEEEDGSTGSLYAISSIGRHFVSGSLGFVPIFSHPALMKAWPNFKDAIIDEDSDLFKKTHGIPMYQYAKTDPTWNKTFNKAMANFCNMEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPQVIQNAPSLPGIEHVGGDMFESVPKGDAMILKAVCHNWSDEKSIKVLKKCHESLPEKGKVIVVEFIMPEEENRETEEAKYVSILDNLMFLHDGRERTEEEFESLCKKSGFSSFKVACCAFSALGVMEFCK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0215 373 CDD AdoMet_MTases 213 310 - -
Lele30g0215 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 35 373 IPR016461 GO:0008168
Lele30g0215 373 FunFam Caffeic acid O-methyltransferase 129 373 - -
Lele30g0215 373 SUPERFAMILY "Winged helix" DNA-binding domain 28 132 IPR036390 -
Lele30g0215 373 MobiDBLite consensus disorder prediction 1 23 - -
Lele30g0215 373 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Lele30g0215 373 PIRSF O-mtase 12 373 IPR016461 GO:0008168
Lele30g0215 373 Gene3D Vaccinia Virus protein VP39 183 362 IPR029063 -
Lele30g0215 373 Gene3D - 42 201 IPR036388 -
Lele30g0215 373 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Lele30g0215 373 PANTHER O-METHYLTRANSFERASE 35 356 IPR016461 GO:0008168
Lele30g0215 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 365 IPR029063 -
Lele30g0215 373 FunFam Caffeic acid 3-O-methyltransferase 11 129 - -
Lele30g0215 373 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0215 Lele-ChrLele30 2591935 2597841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0215 28 363 Monolignol Biosynthesis Gene Families AT5G54160 47.522 1.25e-104 311