Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0213 ATGGCTTTGGATTCTAAAGAAGATTCGTACGGCCTTTCTGCCATGGTTCAGTGTTGTAGCCATGTCTACTGTGCAGCTCTTAAAGCTTCGCTTGACCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCAACCTCTGAAATAGCTTCAAAGCTTCCAACTTCATGTCAACACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTTACTCTCTTCTGAACTGTTCATCTCGTGAGAAAGAAGATGGTGATGGCATTGAGAGACTCTACGCAATTTCTGCTGTTGGAAAGTACTTTGTTGCTGGGGACGATGATGGTGGATACTCGATTCTGTTCTCATCATTCCTTGGTCATAAGGCACTTATGGATGCTTGGATGGATTTTAAGGTTGCCATTATAGAAGAAGACACTGATTTATTCAAGAAAGTTCATGGAATGCCAATGTACGAATACGCAGAGAGAGATCCAACATGGAACAACATGTTCAACAAAGCAATGGCCAACCGTTGCCACATAGAGATGACAAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACGCTTGTTGATGTTGGTGGTGGCACTGGCCAAAGCCTTAAAATGATTCTCTCTAAGTATCCTTCAATTAAGGCTATTAATTTTGATTTGCCCCAAGCCATTCAAAATGCACCACCTCATCCAGGTGTTCCGAAAGGGGATGTCATTATGTTGAAGGCTGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAAGAAATGCCATGAAGCATTACCAGAGAAAGGGAAGGTGATAGTGATGGAATGCATAATGCCTGAAGTAATTGAAACAACAGAAGAAGCCAAGTTTGTAGCAAGCGTGGACAACATCATGTTCCTTCATGATGGAAGAGAAAGAACAGAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGCTTTTCTGGTTTCAAAGTCGCTTCTCGTGCTTTCTTTGCTTTTGGGGTTATGGAATTCTACAAGTAA 1041 0.4092 MALDSKEDSYGLSAMVQCCSHVYCAALKASLDLNLFEIIAKEGGRHVSTSEIASKLPTSCQHKDLAFRIDRLLRLLASYSLLNCSSREKEDGDGIERLYAISAVGKYFVAGDDDGGYSILFSSFLGHKALMDAWMDFKVAIIEEDTDLFKKVHGMPMYEYAERDPTWNNMFNKAMANRCHIEMTRILEIYKGFEGISTLVDVGGGTGQSLKMILSKYPSIKAINFDLPQAIQNAPPHPGVPKGDVIMLKAVCHNWSDENSIKVLKKCHEALPEKGKVIVMECIMPEVIETTEEAKFVASVDNIMFLHDGRERTEKEFESLCKRSGFSGFKVASRAFFAFGVMEFYK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0213 346 PIRSF O-mtase 1 346 IPR016461 GO:0008168
Lele30g0213 346 PANTHER O-METHYLTRANSFERASE 21 336 IPR016461 GO:0008168
Lele30g0213 346 Pfam O-methyltransferase domain 134 327 IPR001077 GO:0008171
Lele30g0213 346 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Lele30g0213 346 Pfam Dimerisation domain 26 77 IPR012967 GO:0046983
Lele30g0213 346 Gene3D Vaccinia Virus protein VP39 168 334 IPR029063 -
Lele30g0213 346 Gene3D - 22 186 IPR036388 -
Lele30g0213 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 346 IPR016461 GO:0008168
Lele30g0213 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 344 IPR029063 -
Lele30g0213 346 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0213 Lele-ChrLele30 2548490 2551509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0213 7 336 Monolignol Biosynthesis Gene Families AT5G54160 48.837 1.33e-105 312