Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0212 ATGACTACGGCTTTAGATTCTAAACAGAAACGTCCTTATGAAGAAGAAGAAGATTCTTATTGTCTCTCTGCCATGCTTCTGGGTTGCAGTCAGGTCTTCTGTGCAGCTCTTAAAGCTTCGCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCGGCCTCTGAAGTAGCTTCAAAGCTTCCGACTTCATCTCAACACAAAGATTTGGTTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCATTCTCTGCTGAATTGTTCATCTCGTGAGAAAGAAGATGGTGATGCCACCGAGATGCTCTATGCAATTTCTCCTGTTGGAAAGTACTTTCTTAGCGATAATGGTGGATTATGTGATGCTGCCTCATTCCAGTGTCATCAAGCACTTGTTGATGTCTGGTTGAATTTTAAGGAAGCAATAATAGACGAAGACACAGACTTGTTCAAGAAAATTCATGGAATGCCAATGTACCAATATGCAAAGACAGATCCAACGTTGAACAAAACATTCAACAAAGCAATGGCCAATGTTTGCAACATAGAAATGAGAAGGATTTTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGTGGAGGCACTGGCCAAAACCTCAAAATGATTGTCTCTAAGTACCCTTCAATTAAGGCTATTAATTTTGATTTGCCCCAAGTTATTCAAAATGCACCACCTCATCCAGGGATTGAGCATCTTGGAGGGGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATCATATTGAAGGCTGTGTGTCACAATTGGTCAGATGAGAAGAGCATCGAAGTGTTGAAGAAATGCCATGAAGCATTGCCAGAGAAAGGGAAAGTGATAGTGGTGGAGCTTTTAATGCCTAAAGTAATTGGAGAAACAAAAGAAGCCAAGTTTGTAACAAGCCTAGACAACATGATGTTTCTTCATGATGGAAGAGAAAGAACTGAGAAACAATTTGAATCTCTTTGTAAACGTTCTGGCTTTTCTCATTTCAAACTTGCTTCTCAAGCTTTCTCTGTTTTAGGAGTCATGGAATTCTACAAATGA 1095 0.3991 MTTALDSKQKRPYEEEEDSYCLSAMLLGCSQVFCAALKASLELNLFEIIAKEGGRHVSASEVASKLPTSSQHKDLVFRIDRLLRLLASHSLLNCSSREKEDGDATEMLYAISPVGKYFLSDNGGLCDAASFQCHQALVDVWLNFKEAIIDEDTDLFKKIHGMPMYQYAKTDPTLNKTFNKAMANVCNIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKAINFDLPQVIQNAPPHPGIEHLGGDMFESVPKGDAIILKAVCHNWSDEKSIEVLKKCHEALPEKGKVIVVELLMPKVIGETKEAKFVTSLDNMMFLHDGRERTEKQFESLCKRSGFSHFKLASQAFSVLGVMEFYK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0212 364 Gene3D Vaccinia Virus protein VP39 120 364 IPR029063 -
Lele30g0212 364 Gene3D - 2 118 IPR036388 -
Lele30g0212 364 FunFam Caffeic acid O-methyltransferase 120 364 - -
Lele30g0212 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 362 IPR029063 -
Lele30g0212 364 Pfam O-methyltransferase domain 141 345 IPR001077 GO:0008171
Lele30g0212 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Lele30g0212 364 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Lele30g0212 364 CDD AdoMet_MTases 205 298 - -
Lele30g0212 364 FunFam Caffeic acid 3-O-methyltransferase 3 118 - -
Lele30g0212 364 SUPERFAMILY "Winged helix" DNA-binding domain 16 122 IPR036390 -
Lele30g0212 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 364 IPR016461 GO:0008168
Lele30g0212 364 PANTHER O-METHYLTRANSFERASE 28 353 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0212 Lele-ChrLele30 2520241 2522482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0212 9 356 Monolignol Biosynthesis Gene Families AT5G54160 49.148 4.11e-114 334