Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele30g0186 | ATGAAGAGGTTGAGGTCTAGCGAGGATCTCCATTCGTACGGAGACAAAAATGGCTGCAAGGATTCGAATCTGAATCGATCCTCGTCTTCTTCACACAGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCATCGTCTTCGGCGTCTCGGTATGACAGGGATCGAACGATGGATGAGGATCGGGAAGGCTCCCGCTTGGTTCGGAAGCGATCAGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGACACTGGAGATAGTCGAGGGTACGGAGCTGGAGGGAATAGGGGTTTGATTCAGAGGTCGGAGAGTTTTTGTGGGTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGGGAAGGCAGTGTGTCGTCGTGGCGGAGATTTGGCGGTGGGTTAAAGGATTTTGATGATAGTGGCAGGGGTAGCAGAGTTGGACTGGAAGATAGAGTAGTGCGGTCTCCGAGGAATTTGAGGGATGTAAAATCCCCGACATGGTCAAAAGATTCAGAGAGCGAGCATTCTAAGATGAGTGAGCAGTCTAAGATGAGGTCTTCTTCAAGAGGATCTAGAGATGCAAAGTCGAAGTCCAAGTCTCCATCATGGTCCAAGGATTCAGAGAGTGAACAATCAAGGAGTGAGCAATCGAAGAGTGTTGAGGTGAAGAAAACTGAGGAAGTGCAGGTCGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAGCTGGAGCCAGAACCCATGCCTGAAACAGAACCAGAAAAGGATCCTAATGCTGCACCTAAGAATGAAGGCCACACCTCTATTCCTTTGGAGGCTGATGAGAAGGAAATCCAGACTGAAAGGCAGCTCAATGTTACAGATACTACTACGCATGAAATACCGGAAGCGTTAAATAAAGAAGAGGCAAAACCCGAAGAGGAAACCGAGTCAGCAGAACAGAATGTGGAGAAAGATGAAAAGCTGCCAGATATTAAGAATGATCCAACTGATCAAGTGCATGATACCGAAAATGAAATCGAAACTTCTGTTCATAATGATAACAAGGCAGGAGAGAGTTTGAAAGTCGAAATCACATGTGAGGGGGAAACAAAGGAAGGTGCGGAGCAAGAGAAATCATTGCTTCATGAAGAGGAACATAAGCAGGAAAATGGTGCAGATCTTGAAACCAGGGCAGACTCTGACAAACCAGAGCCAAACAAGGACGTTTCAACAGAAAATGAAGTGCTTAAAACTGATGGGGAAATGACGACGGAGACTGTAACCAACAATGTGAAGGATAAAGGCAAAAGTGTCTCTGTGACTCCTACTGATGTTGTTCACCCTTCTGAAGATGGTCTGTGGAATGACAGAGGACCCAGAGATCTCACAACATACTCTGGCGATGCCATGGAAGGTCCAAGTACAAGGGGCTTTGAGTTGTTTTCTAGATATCCTGTTAGGAAAGCAGAGAAAACTGACCAATCAAGTCTCAGCAAACATAAAGATGAAAGTCTTTCAATGGAGGATCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTAATGAGAATACACCAGCCCCTGAATCCCCCAGTCAAGCTCGAAGTGTACAGTCTTTGAGTACATTTCGTACCAACTCAGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCGATCGACTTTGAACAATCTGTCCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGTCAGTCTCAGACTGATCCCAAACAGAAAGAAATTCCTTACTGTCAAGGAACTTTGATTAATGGCAGTGGGACTTCTTGTCAGTCCCAAGCAACATGGGGTATTTTGGATGGCCAAGCTGTGAAAGGCCAGCCTTCTAGGGTTGTAGAAGGTCAGCCTTCTAGGGTTCTAGAAAGTAGCTCAAAAATGGCCAGTGGACTTGACAGGCAGTTAAGTTTTCATAAGCAGCTGTCAGGACAGTCAAGGCGCCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGTTCCCATGACATTGGGTCAAGTTATAGTTTTGACAAGAAGAGAGAAATGAGAGACAGGAGTAATGGTAGTTTATATAGAACTGCAAGCCACAAGGAACAAGAACAATTTCAGATGGGTGGAATTGAGTTTGTTGAGACTATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCAATGGCTAAAAAGTTTCATGAAATGGCTGGACAGACTTCATCATGCTTGAAAGAGAGCATTCGTGAGATTATGCTTAATGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTGCAGAACAGGTCTGATATAACCTTGGAGGTTTTACTAAAGGCCCACCGAGTTCAATTGGAAATTTTGGTTGCTTTGAAAACAGGTTTAACTAATTTTATTCAGTTAGACAACAGCATTTCGTCTACTGATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTTTATGCCGGAGTCAATTGCCTGTGGATGAATGCGATTGTAAAGTATGTGCACAGAGAAGTGGCTTTTGCAGGGAATGTATGTGCCTTGTGTGTTCAAAGTTTGACAATGCATCAAATACATGTAGTTGGGTCGGGTGTGATGTTTGCCTTCATTGGTGCCATACGGACTGTGGGTTACGTGAATCATATATTAGAAATGGACACAGTGCTACTGGGGTACAAGGGGTAACTGAGATGCAATTTCATTGTATTGCCTGTGATCATGCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAAGATTGGTCAGTTGAAGCTCTTCGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGAGGTTGCTGATCAAATGCTGCTAAGGTTGGCAAATAAGTCTAAACTTCAAGAGGTTTATAGCCACATCATGTCTTTCCTAAATGATGGAGATTCTCCCAAATTAGCCTTGACACAGAACTTTCCTGGGAAGGAACAAATTAAAGAAAAGAATGCGGTTGCTGAGCCCAGCCATGAAGCTGCCTGGATGAAATCTATCTATTCTGAAAAGACGCCTGTGTTGGAACGGCCAGCAAACATCCTTTCAAGCTTTGACCAGAACGATAAACGGACTCCGCCGCAAGAGTTGCAGACGAATGTCCATAAGGACTATGGTTTTGATGAATTTGAGAGTATAGTAAAAATTAAACTGGCAGAGGCTAAAATGTTTCAAACACGTGCGGATGATGCCAGAAGAGAAGCCGAAGGCCTGAAACGCATTGCCTTGGCAAAGAATGAAAAGATTGAAGAAGAGTACGTCAGCCGGCTCTCGAAGTTGCGACTGGCGGAGACTGAGGAAATGCGTAAACAAAAATTTGAAGAACACCAGGCACTGGAAAGAGCGCATCTGGAGTACTTTAACATGAAAATGAGAATGGAAGCAGACATTAAGGATCTGCTATTGAAAATGGAAGCGACGAAAAGGAGTCTTGCCATGTGA | 3630 | 0.4383 | MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSHRTFYYKPDNVRKGLLSSSSSASRYDRDRTMDEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDSRGYGAGGNRGLIQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRGSRVGLEDRVVRSPRNLRDVKSPTWSKDSESEHSKMSEQSKMRSSSRGSRDAKSKSKSPSWSKDSESEQSRSEQSKSVEVKKTEEVQVESRSSSEMEEGELEPEPMPETEPEKDPNAAPKNEGHTSIPLEADEKEIQTERQLNVTDTTTHEIPEALNKEEAKPEEETESAEQNVEKDEKLPDIKNDPTDQVHDTENEIETSVHNDNKAGESLKVEITCEGETKEGAEQEKSLLHEEEHKQENGADLETRADSDKPEPNKDVSTENEVLKTDGEMTTETVTNNVKDKGKSVSVTPTDVVHPSEDGLWNDRGPRDLTTYSGDAMEGPSTRGFELFSRYPVRKAEKTDQSSLSKHKDESLSMEDLDLSLSLPNVLLPIGANENTPAPESPSQARSVQSLSTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDFEQSVHSRPLFQGIDQVSHGGWQGQSQTDPKQKEIPYCQGTLINGSGTSCQSQATWGILDGQAVKGQPSRVVEGQPSRVLESSSKMASGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRSNGSLYRTASHKEQEQFQMGGIEFVETIIAKIVSEPVPAMAKKFHEMAGQTSSCLKESIREIMLNADKRGQILAFQKVLQNRSDITLEVLLKAHRVQLEILVALKTGLTNFIQLDNSISSTDLAEIFLNLRCRNLLCRSQLPVDECDCKVCAQRSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGVQGVTEMQFHCIACDHASEMFGFVKEVFLNFAKDWSVEALRKELEYVKRIFSASKDMRGRQLHEVADQMLLRLANKSKLQEVYSHIMSFLNDGDSPKLALTQNFPGKEQIKEKNAVAEPSHEAAWMKSIYSEKTPVLERPANILSSFDQNDKRTPPQELQTNVHKDYGFDEFESIVKIKLAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYVSRLSKLRLAETEEMRKQKFEEHQALERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAM | 1209 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele30g0186 | 1209 | PANTHER | VERNALIZATION-INSENSITIVE PROTEIN 3 | 1 | 1207 | IPR004082 | - | |
| Lele30g0186 | 1209 | MobiDBLite | consensus disorder prediction | 118 | 140 | - | - | |
| Lele30g0186 | 1209 | MobiDBLite | consensus disorder prediction | 688 | 739 | - | - | |
| Lele30g0186 | 1209 | MobiDBLite | consensus disorder prediction | 715 | 733 | - | - | |
| Lele30g0186 | 1209 | MobiDBLite | consensus disorder prediction | 56 | 97 | - | - | |
| Lele30g0186 | 1209 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 824 | 839 | IPR004082 | - | |
| Lele30g0186 | 1209 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 770 | 792 | IPR004082 | - | |
| Lele30g0186 | 1209 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 850 | 871 | IPR004082 | - | |
| Lele30g0186 | 1209 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 969 | 988 | IPR004082 | - | |
| Lele30g0186 | 1209 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 809 | 824 | IPR004082 | - |
Showing 1 to 10 of 28 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele30g0186 | 30 | 1864891 | 1869541 | Lele31g0207 | 31 | 2027068 | 2031646 | hybridization | |
| Lele30g0186 | 30 | 1864891 | 1869541 | Lele32g1204 | 32 | 13023774 | 13028429 | hybridization |
Showing 1 to 2 of 2 entries